bioimageflow-restoration-tools
Tools for restoration inference, simple image-processing comparisons, and restoration metrics.
Tools
CAREamicsPredict: runs CAREamics restoration inference from a checkpoint.RestorationMetrics: computes MSE, PSNR, and residual-noise measurements.TotalVariationDenoise: applies Chambolle total-variation denoising.BilateralDenoise: applies edge-preserving bilateral denoising.GaussianDenoise: applies Gaussian smoothing as a simple denoising method.MedianDenoise: removes impulse noise with a SciPy median filter.BackgroundSubtract: subtracts a smoothed background estimate.UnsharpMask: sharpens images by adding high-frequency residuals.RichardsonLucyRestoration: runs Richardson-Lucy deconvolution.
Use the low-SNR restoration workflow in the main workflow catalog for a complete restoration example.
RestoreImage was removed in favor of the dedicated TotalVariationDenoise, BilateralDenoise, GaussianDenoise, and UnsharpMask tools.
BackgroundSubtract.preserve_range was renamed to shift_to_zero because it shifts the minimum to zero rather than preserving the original range.
1 maintainer
Metadata
1 maintainer
Release files for bioimageflow-restoration-tools 0.2.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| bioimageflow_restoration_tools-0.2.0.tar.gz | 12.4 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| bioimageflow_restoration_tools-0.2.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 21.2 kB
Release files / bioimageflow_restoration_tools-0.2.0.tar.gz
| Download URL | bioimageflow_restoration_tools-0.2.0.tar.gz |
|---|---|
| Size | 12.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
21756c4c3164ba071d07bd13f60375bb68b31b44d16232fb428398504223259c
|
|
BLAKE2b-256 checksum How to use checksums |
950c502eea3e63794c4e8c498e4febabebe0603ecbf0944be75530ada7852c28
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
uv/0.10.9 {"installer":{"name":"uv","version":"0.10.9","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"Ubuntu","version":"24.04","id":"noble","libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":true}
|
Release files / bioimageflow_restoration_tools-0.2.0-py3-none-any.whl
| Download URL | bioimageflow_restoration_tools-0.2.0-py3-none-any.whl |
|---|---|
| Size | 8.9 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
32cdafe7db30830cef8e2d124bb4c5b5ec667213ee074ed807d2882a68166ad1
|
|
BLAKE2b-256 checksum How to use checksums |
c9827a0180577123e7ed457c67f2b96e7434b9eabd9bbbbd55a5dd117e1f6dd5
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
uv/0.10.9 {"installer":{"name":"uv","version":"0.10.9","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"Ubuntu","version":"24.04","id":"noble","libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":true}
|
