Skip to main content

BIPackage

Handles basic bioinformatics operations with a python package structure

INSTALLATION

pip

pip install bipackage

pipx

pipx install bipackage

conda

conda env create -f env.yaml

USAGE

On command line,

bip <subcommand> [params]

On python,

import bipackage as bip

bip.function(args*,kwargs**)

Note that params are the parameters for the subcommand.

TAB AUTOCOMPLETION

To enable tab autocompletion, run the following command:

bashrc (For Linux)
run bip once and restart the shell

bip

add to zshrc (For MacOS)

autoload -U bashcompinit
bashcompinit
eval "$(register-python-argcomplete bip)"

This will enable tab autocompletion for the bip command.

Metadata

Release files for bipackage 0.2.6

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for bipackage 0.2.6
File Size Uploaded Provenance Actions
bipackage-0.2.6.tar.gz 49.0 kB Without provenance Details for bipackage-0.2.6.tar.gz

Built distribution (wheel)

Table of built distributions (wheels) for bipackage 0.2.6
File Interpreter ABI Platform Actions
bipackage-0.2.6-py3-none-any.whl Python 3 none any Details for bipackage-0.2.6-py3-none-any.whl

Total release size: 114.9 kB

Release files / bipackage-0.2.6.tar.gz

Download URL bipackage-0.2.6.tar.gz
Size 49.0 kB
Tags Source
SHA-256 checksum
How to use checksums
f1cbe0b314d41bd442410e01abb73d69f73fa552645dba22c51875ae30377c25
BLAKE2b-256 checksum
How to use checksums
0c57576fd55c482f5e7708d2c55d1b87c0b0c2b732646c588aca8fe5d0d2c910
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via poetry/2.1.3 CPython/3.12.10 Windows/10

Release files / bipackage-0.2.6-py3-none-any.whl

Download URL bipackage-0.2.6-py3-none-any.whl
Size 65.9 kB
Tags Python 3
SHA-256 checksum
How to use checksums
c21249f0046ae2e42e57cfc1b54b46c32a0b201493fa73f25453ce62ce89de61
BLAKE2b-256 checksum
How to use checksums
6d3cc6da2af9227415b927052712512fff2eba66a5ff3d3191f97ecc212fc7d8
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via poetry/2.1.3 CPython/3.12.10 Windows/10

Security for bipackage 0.2.6

Provenance

Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.

No provenance found

None of the files in this release were uploaded with provenance metadata.

A note on package security

PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.

To learn more about protecting yourself from malicious actors, visit our package security documentation.

Anthropic, PBC Visionary sponsor Bloomberg Visionary sponsor Hudson River Trading Visionary sponsor Meta Visionary sponsor NVIDIA Visionary sponsor Microsoft Sustainability sponsor Depot Continuous Integration AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page