BIPackage

Handles basic bioinformatics operations with a python package structure

INSTALLATION

pip

pip install bipackage

pipx

pipx install bipackage

conda

conda env create -f env.yaml

USAGE

On command line,

bip <subcommand> [params]

On python,

import bipackage as bip

bip.function(args*,kwargs**)

Note that params are the parameters for the subcommand.

TAB AUTOCOMPLETION

To enable tab autocompletion, run the following command:

bashrc (For Linux)
run bip once and restart the shell

bip

add to zshrc (For MacOS)

autoload -U bashcompinit
bashcompinit
eval "$(register-python-argcomplete bip)"

This will enable tab autocompletion for the bip command.