Bioinformatics tools package
Project description
BIPackage
Handles basic bioinformatics operations with a python package structure
INSTALLATION
pip
pip install bipackage
pipx
pipx install bipackage
conda
conda env create -f env.yaml
USAGE
On command line,
bip <subcommand> [params]
On python,
import bipackage as bip
bip.function(args*,kwargs**)
Note that params are the parameters for the subcommand.
TAB AUTOCOMPLETION
To enable tab autocompletion, run the following command:
bashrc (For Linux)
run bip once and restart the shell
bip
add to zshrc (For MacOS)
autoload -U bashcompinit
bashcompinit
eval "$(register-python-argcomplete bip)"
This will enable tab autocompletion for the bip command.
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