Skip to main content

Bioinformatics tools package

Reason this release was yanked:

missing dependency

Project description

BIPackage

Handles basic bioinformatics operations with a python package structure

INSTALLATION

pip

pip install bipackage

pipx

pipx install bipackage

conda

conda env create -f env.yaml

USAGE

On command line,

bip <subcommand> [params]

On python,

import bipackage as bip

bip.function(args*,kwargs**)

Note that params are the parameters for the subcommand.

TAB AUTOCOMPLETION

To enable tab autocompletion, run the following command:

bashrc (For Linux)
run bip once and restart the shell

bip

add to zshrc (For MacOS)

autoload -U bashcompinit
bashcompinit
eval "$(register-python-argcomplete bip)"

This will enable tab autocompletion for the bip command.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

bipackage-0.2.0.tar.gz (47.5 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

bipackage-0.2.0-py3-none-any.whl (62.5 kB view details)

Uploaded Python 3

File details

Details for the file bipackage-0.2.0.tar.gz.

File metadata

  • Download URL: bipackage-0.2.0.tar.gz
  • Upload date:
  • Size: 47.5 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: poetry/2.1.3 CPython/3.12.10 Windows/10

File hashes

Hashes for bipackage-0.2.0.tar.gz
Algorithm Hash digest
SHA256 4028f0dae5d55679f8fb21a3abbbc808a18f7e1315e764a67f03cda8ed280217
MD5 de9630910c31332ebe87f1c910817ca2
BLAKE2b-256 72aca8fba3a575292fd02169cc80dbe6083d3d8a0c5996875b662ab8d60c0523

See more details on using hashes here.

File details

Details for the file bipackage-0.2.0-py3-none-any.whl.

File metadata

  • Download URL: bipackage-0.2.0-py3-none-any.whl
  • Upload date:
  • Size: 62.5 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: poetry/2.1.3 CPython/3.12.10 Windows/10

File hashes

Hashes for bipackage-0.2.0-py3-none-any.whl
Algorithm Hash digest
SHA256 07dd8b28ba41688c3b882d1dd051c7613c3660aa61be7a255650e28018750195
MD5 9446ef976a9d3a89e4dcdecab1fb3e4e
BLAKE2b-256 afca7953bf95adba55667dc42bb5adbaacc1bd164c3df8463d9d1b04ccba9fdf

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page