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An easy way to calculate CCBHC measurements.

Project description

CCBHC Measurements

Table of Contents

Purpose

The goal of this package is to simplify the process for calculating CCBHC measurements for all CCBHCs. Here's how it works, using the DEP-REM-6 as an example: simple example of how the package works Click here for the more detailed DEP-REM-6 example pdf

Our code is simple:

  1. Import the Measurement you want to calculate.
  2. Give it the required data (downloaded excel reports from your EHR, query data from SQL, or whatever)
  3. Run get_all_submeasures(). Under the hood, get_all_submeasures() determines which data meets the Measurments criteria and which does not.
  4. Export your data to your preferred tool for analysis. If you want to keep it in pandas, you already have it. If you want to use Excel, or Power BI, you can export it there as well!

Currently Supported Measurements

The definition for these Measurements can be found at https://www.samhsa.gov/sites/default/files/ccbhc-quality-measures-technical-specifications-manual.pdf

At the moment we only have these Measurements, but we plan on releasing a new Measurement every two weeks.

Code Demonstration

import pandas as pd
import ccbhc_measurements as ccbhc

- Step 1: Load in the data into Pandas Dataframes

all_inclusive_excel_file = r"../file/path/to/Dep Rem Data.xlsx"
phq_data = pd.read_xlsx(all_inclusive_excel_file, sheet_name = "phq9")
diagnosis_data = pd.read_xlsx(all_inclusive_excel_file, sheet_name = "diagnosis")
demographic_data = pd.read_xlsx(all_inclusive_excel_file, sheet_name = "demographic")
insurance_data = pd.read_xlsx(all_inclusive_excel_file, sheet_name = "insurance")

- Step 2: Ensure that the dataframes follows the correct schema

Dep Rem 6 Required Data Input and Output Diagram

phq_data = phq_data[["patient_id","patient_DOB","encounter_id","encounter_datetime","total_score"]].copy()
diagnosis_data = diagnosis_data[["patient_id","encounter_datetime","diagnosis"]].copy()
demographic_data = demographic_data[["patient_id","race","ethnicity"]].copy()
insurance_data = insurance_data[["patient_id","insurance","start_datetime","end_datetime"]].copy()

- Step 3: Calculate Dep-Rem

submeasure_data = [phq_data,diagnosis_data,demographic_data,insurance_data]
measure = ccbhc.Dep_Rem(submeasure_data)
results = measure.get_all_submeasures()s
for name, data in results.items():
    data.to_excel(name+".xlsx", index=False)

De-panda-cies

License

CC BY-NC-SA 4.0

Installation

Binary installers for the latest released version are available at the Python Package Index (PyPI)

# PyPI
pip install ccbhc_measurements

Contributors

  • Alex Gursky
  • Yisroel Len

Contributions and Discussions

Feel free to add and create you own Measurements. All Measurements should follow this uml. Send us your recomendations, bugs, questions or feedback at agursky@pesachtikvah.com


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