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Python Interface for Residue-Residue Contact Predictions

Project Description

A Python Interface to Contact Predictions

This project is a result of the continuous struggle using residue-residue contact prediction pipelines, visualisation tools and related software. The aim was to reduce this complexity and provide one unified interface as a basic platform. The resulting interface is the Contact Prediction ToolKit, or ConKit.

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Key Features

  • Parsers for Multiple Sequence Alignment and contact prediction files
  • Analysis functions for Multiple Sequence Alignment and contact prediction data
  • Visualisation of Multiple Sequence Alignment and contact prediction data
  • Easy-to-use Python wrappers for the contact prediction related software

For a quick overview of ConKit, watch this video.

Installation & Usage

Please refer to ConKit’s documentation.


There are two ways by which you can contribute to ConKit:

  1. Submit any suggestions to the GitHub Issue Tracker, or
  2. Fork this repository, commit your changes and submit a pull request.

Found a Bug?

Please use the GitHub Issue Tracker.

Release history Release notifications

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Filename, size & hash SHA256 hash help File type Python version Upload date
conkit-0.9.0.tar.gz (66.5 kB) Copy SHA256 hash SHA256 Source None Apr 8, 2018

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