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A simple Django app to conduct web-based blast+ local alignment search.

Project description


A simple Django app to conduct web-based homology search with blast+.


  1. Blast+
  2. Python 3.6+
  3. Django 3.0
  4. Biopython


pip install -r requirements/base.txt


Quick start

Add "blastplus" to your INSTALLED_APPS setting like this::
Include the polls URLconf in your project like this::
url(r'^blast/', include('blastplus.urls')),
You can modify some defaults in blastplus.settings
- e.g. modify path to nucleotide database::
                "name": "sample1",
                "path": 'blastplus/sampledata/sample_db1/sample_db',
                "desc": "Sample database 1",
                "annotated": False, },
                "name": "sample2",
                "path": 'blastplus/sampledata/sample_db2/sample_db2',
                "desc": "Sample database 2",
                "annotated": False, },
Visit search pages:


See our NewtBase portal with django-blastplus app inside. Code newtbase @ github

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