DNA Cauldron provides a generic cloning simulation framework to predict constructs sequences and detect assembly flaws. It can simulate Golden-Gate, with extra features like enzyme or connector parts autoselection, and other methods like Gibson Assembly, LCR Assembly, BASIC assembly, BioBrick assembly. It supports single and combinatorial assemblies, hierarchical assemblies, and produces nice reports for traceability and troubleshooting.
Infos
PIP installation:
pip install dnacauldronWeb documentation: https://edinburgh-genome-foundry.github.io/DnaCauldron/
Github Page: https://github.com/Edinburgh-Genome-Foundry/DnaCauldron
Live demo: http://cuba.genomefoundry.org/simulate_gg_assemblies
License: MIT
Copyright 2020 Edinburgh Genome Foundry, University of Edinburgh
More biology software
DNA Cauldron is part of the EGF Codons synthetic biology software suite for DNA design, manufacturing and validation.
1 maintainer
Release files for dnacauldron 2.0.12
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| dnacauldron-2.0.12.tar.gz | 82.3 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| dnacauldron-2.0.12-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 187.5 kB
Release files / dnacauldron-2.0.12.tar.gz
| Download URL | dnacauldron-2.0.12.tar.gz |
|---|---|
| Size | 82.3 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
c31e21b6b65e239f4be25bff886b6a1f2b9102ec7a1d27d388d9c0949838cf8f
|
|
BLAKE2b-256 checksum How to use checksums |
8f92eb5f4c43d15a7400f9f09792e79b48548705876fbfe220bd3ef2bc4e9190
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.12.9
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on May 12, 2025.
Transparency logRelease files / dnacauldron-2.0.12-py3-none-any.whl
| Download URL | dnacauldron-2.0.12-py3-none-any.whl |
|---|---|
| Size | 105.2 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
86e579279b3815daf6ecb814e888bce5dbd3b7ee41ea99de4d12dc27120fae60
|
|
BLAKE2b-256 checksum How to use checksums |
fd09bbc917589aa38a8ce8276288820dd5df6ee648c7b1366b5d40d8a5a30e0f
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.12.9
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on May 12, 2025.
Transparency log
