ensembl-rest-client 0.1.4b0

Python access to the Ensembl REST API

Getting Started with enembl-rest-client

version: 0.1.4b0

enembl-rest-client provides Pythonic access to the Ensembl REST services. I build this for some of my other projects to use as there was not anything implemented at the time. It implemented most the current endpoints at http://rest.ensembl.org at the time but I have not checked all the current endpoints.

Note that not all the implemented endpoint methods have been tested properly. They are being tested as they are used and having a pytest test written for them.

Now there are other ensembl rest implementations. You may be better using these:

• https://pypi.org/project/pyEnsemblRest/
• https://pypi.org/project/ensembl-rest/

There is online documentation for ensembl-rest-client.

Installation instructions

You can install using pip or conda.

Installation using pip

pip install ensembl-rest-client

Installation using conda

I maintain a conda package in my personal conda channel. To install this please run:

conda install -c cfin -c conda-forge ensembl-rest-client

Basic usage

There are some examples in ./resources/examples where . is the root of the cloned repository.

Run tests

If you have cloned the repository, you can also run the tests using pytest ./tests, if any fail please contact us (see the contribution page for contact info).