Skip to main content
Yanked

This release has been yanked by its maintainers, and will be ignored by installers, except when explicitly specified.
Consider using release 0.8.1 instead.
Reason given by maintainers: bug detected

equilibrator-cache

PyPI version Anaconda-Server Badge Python version MIT license

pipeline status codecov Join our Google group Documentation Status

A database application for caching data used by eQuilibrator and related projects. Stored data includes compound names, structures, protonation state information, reaction and enzyme info, and cross-references to other databases. All compounds stored in equilibrator-cache are cross-referenced using InChIKey.

Supported Chemical Databases:

Which database you get

Installing pulls in equilibrator-cache-data, about 24 MB, which carries every compound in the KEGG and BiGG namespaces with its thermodynamic data. That covers most work and needs no download at all:

from equilibrator_cache import create_compound_cache_from_zenodo

ccache = create_compound_cache_from_zenodo()

An identifier outside that set pulls the complete ~1.3 GB database from Zenodo, once, and everything afterwards is served from it. An identifier that exists nowhere raises straight away instead, so a typo never costs a download. Name search works on the bundled data too, escalating only when it cannot find an exact match and therefore cannot rule out a better one.

Pass tier="full" to fetch the complete database up front, or tier="bundled" to start from the bundled data even on a machine that already holds the full one, which the default would otherwise prefer.

Release files for equilibrator-cache 0.8.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for equilibrator-cache 0.8.0
File Size Uploaded
equilibrator_cache-0.8.0.tar.gz 30.1 kB Details

Built distribution (wheel)

Table of built distributions (wheels) for equilibrator-cache 0.8.0
File Interpreter ABI Platform
equilibrator_cache-0.8.0-py2.py3-none-any.whl Python 2, Python 3 none any Details

Total release size: 76.6 kB

Release files / equilibrator_cache-0.8.0.tar.gz

Download URL equilibrator_cache-0.8.0.tar.gz
Size 30.1 kB
Tags Source
SHA-256 checksum
How to use checksums
ba6d9ee6fbb3b8869720b92b4f25f4d797e899e7dca2803dcdd187f896ec7850
BLAKE2b-256 checksum
How to use checksums
61ce829969d23fd9ed89c152848c16c70c78eaeb1491eb87c7021381763322d5
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via twine/7.0.0 CPython/3.14.7

Release files / equilibrator_cache-0.8.0-py2.py3-none-any.whl

Download URL equilibrator_cache-0.8.0-py2.py3-none-any.whl
Size 46.5 kB
Tags Python 2 Python 3
SHA-256 checksum
How to use checksums
7f53711fd769b9f448443d3f8523ea866b0eb7c6aa13619c088f3b41560a7a6c
BLAKE2b-256 checksum
How to use checksums
1681ee38b564f73690810725faaa6f2b7ddfdbe0d139ee02aa7afb75ab9306b3
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via twine/7.0.0 CPython/3.14.7

Release history Release notifications | RSS feed

0.8.1

2 release files

This release

0.8.0 This release

2 release files

0.7.1

2 release files

0.7.0

2 release files

0.6.2

2 release files

0.6.1

2 release files

0.6.0

2 release files

0.5.4

2 release files

0.5.2

2 release files

0.5.1

2 release files

0.5.0

2 release files

0.4.6

2 release files

0.4.5

2 release files

0.4.3

2 release files

0.4.2

2 release files

0.4.1

2 release files

0.4.0

2 release files

0.3.2

2 release files

0.3.1

2 release files

0.2.9

2 release files

0.2.7

2 release files

0.2.6

2 release files

0.2.4

2 release files

0.2.0

2 release files

0.1.9

2 release files

0.1.8

2 release files

0.1.7

2 release files

0.1.6

2 release files

0.1.5

2 release files

0.1.4

2 release files

0.1.3

2 release files

0.1.1

2 release files

Anthropic, PBC Visionary sponsor Bloomberg Visionary sponsor Hudson River Trading Visionary sponsor Meta Visionary sponsor NVIDIA Visionary sponsor Microsoft Sustainability sponsor Depot Continuous Integration AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page