This release is a pre-release and may not be stable for production use.
everyome-pipelines
The Nextflow pipelines that Everyome modules use (nf-core/rnaseq 3.27.0, nf-core/scrnaseq 4.2.0, nf-core/genomeassembler 2.0.1, nf-core/bacass 2.6.1 and nf-core/proteinfold 2.0.0), with the Nextflow plugins they need, pinned to exact releases and checked by SHA-256. Install it next to Everyome:
pip install "everyome[all]==0.1.0a2" "everyome-pipelines==0.1.0a2"
When you press Run, Everyome copies the pipeline to your cluster once, checks
it there, and runs that copy offline. See Everyome's docs/PIPELINES.md.
Building (maintainers): python -m everyome.core.pipelines build --into pipelines/everyome_pipelines/bundles,
then python -m build pipelines. The build fails if anything fetched differs from the pinned checksums.
1 maintainer
Metadata
1 maintainer
Release files for everyome-pipelines 0.1.0a2
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| everyome_pipelines-0.1.0a2.tar.gz | 30.2 MB | Without provenance | Details for everyome_pipelines-0.1.0a2.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| everyome_pipelines-0.1.0a2-py3-none-any.whl | Python 3 | none | any | Details for everyome_pipelines-0.1.0a2-py3-none-any.whl |
Total release size: 60.4 MB
Release files / everyome_pipelines-0.1.0a2.tar.gz
| Download URL | everyome_pipelines-0.1.0a2.tar.gz |
|---|---|
| Size | 30.2 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
b72b844b076d4788133c449dd346d42506c3a1c2fd939478adcd75f7efcc9f4c
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BLAKE2b-256 checksum How to use checksums |
7ebbd6d2baef9211eb1b705de46b8effb65e57103dbd3778478cd6439dd845d0
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.10
|
Release files / everyome_pipelines-0.1.0a2-py3-none-any.whl
| Download URL | everyome_pipelines-0.1.0a2-py3-none-any.whl |
|---|---|
| Size | 30.2 MB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
f3532b53b8ffd3cc87172fcf17d7237c784b7ee31f052b2bcd396dfa4ac716d6
|
|
BLAKE2b-256 checksum How to use checksums |
d293128b57d9fd183f3adb04af950afa84ef0b588b5cb7ed9f46858c7a1a1ab7
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.10
|
Security for everyome-pipelines 0.1.0a2
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