This release is a pre-release and may not be stable for production use.
everyome-pipelines
The Nextflow pipelines that Everyome modules use (nf-core/rnaseq 3.27.0, nf-core/scrnaseq 4.2.0, nf-core/genomeassembler 2.0.1, nf-core/bacass 2.6.1 and nf-core/proteinfold 2.0.0), with the Nextflow plugins they need, pinned to exact releases and checked by SHA-256. Install it next to Everyome:
pip install "everyome[all]==0.1.0a3" "everyome-pipelines==0.1.0a3"
When you press Run, Everyome copies the pipeline to your cluster once, checks
it there, and runs that copy offline. See Everyome's docs/PIPELINES.md.
Building (maintainers): python -m everyome.core.pipelines build --into pipelines/everyome_pipelines/bundles,
then python -m build pipelines. The build fails if anything fetched differs from the pinned checksums.
1 maintainer
Metadata
1 maintainer
Release files for everyome-pipelines 0.1.0a3
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| everyome_pipelines-0.1.0a3.tar.gz | 30.2 MB | Without provenance | Details for everyome_pipelines-0.1.0a3.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| everyome_pipelines-0.1.0a3-py3-none-any.whl | Python 3 | none | any | Details for everyome_pipelines-0.1.0a3-py3-none-any.whl |
Total release size: 60.4 MB
Release files / everyome_pipelines-0.1.0a3.tar.gz
| Download URL | everyome_pipelines-0.1.0a3.tar.gz |
|---|---|
| Size | 30.2 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
6a2aa7518ffe7fa664504fce8290b2b11704fd78080690bd249b477b871eb577
|
|
BLAKE2b-256 checksum How to use checksums |
9cf83c63dcbd253b1e17f589b4810fa0be07b99bb9311604f709bfee402b2da2
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.10
|
Release files / everyome_pipelines-0.1.0a3-py3-none-any.whl
| Download URL | everyome_pipelines-0.1.0a3-py3-none-any.whl |
|---|---|
| Size | 30.2 MB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
799aa671ffc252e2d4a3e66432f2467258e80a67f7c39f462d33db048690a046
|
|
BLAKE2b-256 checksum How to use checksums |
a44bcfcae3deae60886d266bb96c2605db50273b23f839b3a89baf27c31b47c8
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.10
|
Security for everyome-pipelines 0.1.0a3
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
No provenance found
None of the files in this release were uploaded with provenance metadata.
A note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
To learn more about protecting yourself from malicious actors, visit our package security documentation.
