This release is a pre-release and may not be stable for production use.
everyome-pipelines
The Nextflow pipelines that Everyome modules use (nf-core/rnaseq 3.27.0, nf-core/scrnaseq 4.2.0, nf-core/genomeassembler 2.0.1, nf-core/bacass 2.6.1, nf-core/proteinfold 2.0.0, nf-core/sarek 3.11.0, nf-core/hic 2.1.0, nf-core/riboseq 2.0.0 and nf-core/atacseq 2.1.2), with the Nextflow plugins they need, pinned to exact releases and checked by SHA-256. Install it next to Everyome:
pip install "everyome[all]==<version>" # the pipelines package comes with it, at the same version
When you press Run, Everyome copies the pipeline to your cluster once, checks
it there, and runs that copy offline. See Everyome's docs/PIPELINES.md.
Building (maintainers): python -m everyome.core.pipelines build --into pipelines/everyome_pipelines/bundles,
then python -m build pipelines. The build fails if anything fetched differs from the pinned checksums.
1 maintainer
Metadata
1 maintainer
Release files for everyome-pipelines 0.1.0a7
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| everyome_pipelines-0.1.0a7.tar.gz | 75.4 MB | With provenance | Details for everyome_pipelines-0.1.0a7.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| everyome_pipelines-0.1.0a7-py3-none-any.whl | Python 3 | none | any | Details for everyome_pipelines-0.1.0a7-py3-none-any.whl |
Total release size: 150.9 MB
Release files / everyome_pipelines-0.1.0a7.tar.gz
| Download URL | everyome_pipelines-0.1.0a7.tar.gz |
|---|---|
| Size | 75.4 MB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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twine/7.0.0 CPython/3.13.16
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Transparency logRelease files / everyome_pipelines-0.1.0a7-py3-none-any.whl
| Download URL | everyome_pipelines-0.1.0a7-py3-none-any.whl |
|---|---|
| Size | 75.4 MB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
eaca3dbe248a6909bab7b7082f60731a8047284645ac01713af83d0b4949ffd3
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BLAKE2b-256 checksum How to use checksums |
f393b8f1adffa95ea248cb6c9675610d85d6c227992724805ebc0401e34d4d9b
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Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/7.0.0 CPython/3.13.16
|
Provenance
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Transparency logSecurity for everyome-pipelines 0.1.0a7
Provenance
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Attestation for everyome_pipelines-0.1.0a7.tar.gz
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Nov 5, 2026.
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