Skip to main content

A package for processing FCS files

Project description

fcsy

https://img.shields.io/pypi/v/fcsy.svg https://img.shields.io/travis/nehcgnay/fcsy.svg

A package for processing FCS files.

  • Free software: MIT license

Installation

pip install fcsy

Usage

Read a fcs file to pandas DataFrame.

import fcsy

df = fcsy.read_fcs('input_file')

Read a fcs file with “long name”

df = fcsy.read_fcs('input_file', name_type='long')

# or only read the names

long_names = fcsy.read_fcs_names('input_file', name_type='long')

Write a data frame to fcs. df.columns is written to both short and long names of the fcs.

fcsy.write_fcs(df, 'output_file')

Write to fcs with “long name”. df.columns and long_names are written to short and long names of the fcs.

fcsy.write_fcs(df, 'output_file', long_names=['a','b','c'])

Credits

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.

History

0.1.0 (2018-12-18)

  • First release on PyPI.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Filename, size & hash SHA256 hash help File type Python version Upload date
fcsy-0.2.1-py2.py3-none-any.whl (5.9 kB) Copy SHA256 hash SHA256 Wheel py2.py3
fcsy-0.2.1.tar.gz (12.3 kB) Copy SHA256 hash SHA256 Source None

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN SignalFx SignalFx Supporter DigiCert DigiCert EV certificate StatusPage StatusPage Status page