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A package for processing FCS files

Project description

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fcsy: A package for processing FCS files.

Installation

.. code-block:: console

$ pip install fcsy

Usage

Read a fcs

.. code-block:: python

from fcsy import DataFrame

df = DataFrame.from_fcs('sample1.fcs', channel_type='multi')

Write a dataframe to fcs

.. code-block:: python

import numpy as np
from fcsy import DataFrame

df = DataFrame(np.random.rand(10, 4), columns=list('ABCD'))
df.to_fcs('sample1.fcs')

Read fcs channels without data

.. code-block:: python

from fcsy import read_channels

read_channels('sample1.fcs', channel_type='multi')

Read events number

.. code-block:: python

from fcsy import read_events_num

read_events_num('sample1.fcs')

Documentation

The documentation is available on https://fcsy.readthedocs.io/

License

  • Free software: MIT license

History

Consult the Releases_ page for fixes and enhancements of each version.

.. _Releases: https://github.com/nehcgnay/fcsy/releases

======= History

Consult the Releases_ page for fixes and enhancements of each version.

.. _Releases: https://github.com/nehcgnay/fcsy/releases

Project details


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