gOSh - gOS sHell: A CLI tool for the nf-gOS pipeline
Project description
gOSh
A CLI for the nf-gOS pipeline.
Quickstart
gosh run pipelineto run the nf-gos pipeline (make sure to provide a samplesheet)gosh skilift upto convert the pipeline outputs into something ingestible by the gOS frontend- (optional)
gosh run outputs -p [pipeline results directory] -s [samplesheet path]to generate a csv containing your outputs
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distributions
No source distribution files available for this release.See tutorial on generating distribution archives.
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
gosh_cli-0.1.1-py3-none-any.whl
(30.2 kB
view details)
File details
Details for the file gosh_cli-0.1.1-py3-none-any.whl.
File metadata
- Download URL: gosh_cli-0.1.1-py3-none-any.whl
- Upload date:
- Size: 30.2 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.9.13
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
0e6d2c5128f42cfced4eb1c1a2879b2ecb3f01bc3757cfa12f309317182598f4
|
|
| MD5 |
6f6c97c18c84b7ccc028e13c10242769
|
|
| BLAKE2b-256 |
1dceee738af709b14d8b1bef97ecdf572506ab8ae7fa693cbed829a3ce2697f8
|
