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Maphelios

Package to find and plot inserts alongside the genome or contigs.

BLAST is required. You can follow the instructions to download and install BLAST here.

Installation

pip install git+https://git.embl.org/grp-zimmermann-kogadeeva/Maphelios.git

Running

Docker

To run the streamlit app with docker:

docker run -it --rm -p 8501:8501 docker://registry.git.embl.org/grp-zimmermann-kogadeeva/maphelios:0.7.3

Apptainer

To run the streamlit app with apptainer:

apptainer exec --no-home --writable-tmpfs --workdir /app docker://registry.git.embl.org/grp-zimmermann-kogadeeva/maphelios:0.7.3 streamlit run /app/app/app.py --server.headless true

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Release history Release notifications | RSS feed

0.8.27

2 files

0.8.26

2 files

0.8.25

2 files

0.8.24

2 files

0.8.23

2 files

0.8.22

2 files

0.8.21

2 files

0.8.20

2 files

0.8.19

2 files

0.8.18

2 files

0.8.17

2 files

0.8.16

2 files

0.8.15

2 files

0.8.14

2 files

This release

0.8.13 This release

2 files

0.8.12

2 files

0.8.11

2 files

0.8.10

2 files

0.8.9

2 files

0.8.8

2 files

0.8.5

2 files

0.8.4

2 files

0.8.3

2 files

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