Skip to main content

MoSeq2-model

codecov DOI

Installation

moseq2-model is one package of the MoSeq2 pipeline. Install the whole pipeline:

python -m pip install moseq2-app

You need Python 3.10 or newer on your system. The installation guide carries the whole procedure, including the notebooks.

To install this package on its own: python -m pip install moseq2-model.

Documentation: MoSeq2 Wiki

You can find more information about MoSeq Pipeline, installation, step-by-step instructions, documentation for Command Line Interface(CLI), tutorials etc in MoSeq2 Wiki.

You can run moseq2-model --version to check the current version and moseq2-model --help to see all the commands.

Usage: moseq2-model [OPTIONS] COMMAND [ARGS]...

Options:
  --version  Show the version and exit.  [default: False]
  --help     Show this message and exit.  [default: False]

Commands:
  count-frames  Counts number of frames in given h5 file (pca_scores)
  kappa-scan    Batch fit multiple models scanning over different syllable...
  learn-model   Trains ARHMM on PCA Scores with given training parameters

Community Support and Contributing

  • Please join MoSeq Slack Channel to post questions and interactive with MoSeq developers and users.
  • If you encounter bugs, errors or issues, please submit a Bug report here. We encourage you to check out the troubleshooting and tips section and search your issues in the existing issues first.
  • If you want to see certain features in MoSeq or you have new ideas, please submit a Feature request here.
  • If you want to contribute to our codebases, please check out our Developer Guidelines.
  • Please tell us what you think by filling out this user survey.

License

MoSeq is freely available for academic use under a license provided by Harvard University. Please refer to the license file for details. If you are interested in using MoSeq for commercial purposes please contact Bob Datta directly at srdatta@hms.harvard.edu, who will put you in touch with the appropriate people in the Harvard Technology Transfer office.

Metadata

Release files for moseq2-model 1.4.5

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for moseq2-model 1.4.5
File Size Uploaded Provenance Actions
moseq2_model-1.4.5.tar.gz 38.1 kB With provenance Details for moseq2_model-1.4.5.tar.gz

Built distribution (wheel)

Table of built distributions (wheels) for moseq2-model 1.4.5
File Interpreter ABI Platform Actions
moseq2_model-1.4.5-py3-none-any.whl Python 3 none any Details for moseq2_model-1.4.5-py3-none-any.whl

Total release size: 80.4 kB

Release files / moseq2_model-1.4.5.tar.gz

Download URL moseq2_model-1.4.5.tar.gz
Size 38.1 kB
Tags Source
SHA-256 checksum
How to use checksums
439021fea0eca7235933bff768bb9c28d3b2c6b646bc1d57a7dfc54d20331a9a
BLAKE2b-256 checksum
How to use checksums
01bed514765c514a8f1c13fddf5a1cf50addef8aa00d9e39de5dcbdb98e0f982
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
Yes
Uploaded via twine/7.0.0 CPython/3.13.16

Provenance

Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.

PyPI Publish Attestation

PyPI verified that this artifact, at this checksum, originated from the publisher listed below.

Signed by GitHub Actions, verified by PyPI on Oct 30, 2026.

Transparency log

Release files / moseq2_model-1.4.5-py3-none-any.whl

Download URL moseq2_model-1.4.5-py3-none-any.whl
Size 42.4 kB
Tags Python 3
SHA-256 checksum
How to use checksums
538bfc26f17a89ccd86379d9f49d4c4ff774aacc02e3acdbdc345cbc3b4b05d8
BLAKE2b-256 checksum
How to use checksums
b353d53813326d7afd870e3fc717c51b44dc54992effa41d484f19b84aa2903f
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
Yes
Uploaded via twine/7.0.0 CPython/3.13.16

Provenance

Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.

PyPI Publish Attestation

PyPI verified that this artifact, at this checksum, originated from the publisher listed below.

Signed by GitHub Actions, verified by PyPI on Oct 30, 2026.

Transparency log

Security for moseq2-model 1.4.5

Provenance

Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.

Full provenance

All 2 files in this release have been uploaded with provenance metadata.

Select from 2 files

Attestation for moseq2_model-1.4.5.tar.gz

PyPI Publish Attestation

PyPI verified that this artifact, at this checksum, originated from the publisher listed below.

Signed by GitHub Actions, verified by PyPI on Oct 30, 2026.

Transparency log

A note on package security

PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.

To learn more about protecting yourself from malicious actors, visit our package security documentation.

Anthropic, PBC Visionary sponsor Bloomberg Visionary sponsor Hudson River Trading Visionary sponsor Meta Visionary sponsor NVIDIA Visionary sponsor Microsoft Sustainability sponsor Depot Continuous Integration AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page