napari-itk-io
Image metadata, e.g. the pixel spacing, origin, and metadata tags, are preserved and passed into napari.
Supported image file formats:
- BioRad
- BMP
- DICOM
- DICOM Series
- ITK HDF5
- JPEG
- GE4,GE5,GEAdw
- Gipl (Guys Image Processing Lab)
- LSM
- MetaImage
- MINC 2.0
- MGH
- MRC
- NifTi
- NRRD
- Portable Network Graphics (PNG)
- Tagged Image File Format (TIFF)
- VTK legacy file format for images
For DICOM Series, select the folder containing the series with File -> Open Folder.... The first series will be selected and sorted spatially.
Installation
You can install napari-itk-io via pip:
pip install napari-itk-io
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
Follow the itk contributing guidelines and the itk code of conduct.
License
Distributed under the terms of the Apache Software License 2.0 license, "napari-itk-io" is free and open source software.
Issues
If you encounter any problems, please file an issue along with a detailed description.
1 maintainer
Release files for napari-itk-io 0.4.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| napari_itk_io-0.4.1.tar.gz | 15.4 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| napari_itk_io-0.4.1-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 27.9 kB
Release files / napari_itk_io-0.4.1.tar.gz
| Download URL | napari_itk_io-0.4.1.tar.gz |
|---|---|
| Size | 15.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.12.7
|
Release files / napari_itk_io-0.4.1-py3-none-any.whl
| Download URL | napari_itk_io-0.4.1-py3-none-any.whl |
|---|---|
| Size | 12.5 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.12.7
|
