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napari-nucleation-analyzer

GitHub License Python Version Unit tests

This Napari plugin allows you to:

  • Detect pairs of centrioles and track them over time to form centrosomes.
  • Build arcs of desired radius and angle aligned with the vector pointing towards the other centriole of the pair.
  • Build kymographs of these arcs.
  • Find spots on the kymographs.
  • Produce a CSV file containing a column per centrosome and a line per time point giving the number of spots at each T.

This README is very short, for further information, refer yourself to the documentation.

If you run in any trouble, you can ❗open a ticket.

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