Nextstrain CLI

This is the source code repository for a program called nextstrain, the Nextstrain command-line interface (CLI). It aims to provide a consistent way to run and visualize pathogen builds and access Nextstrain components like Augur and Auspice across computing platforms such as Docker, Conda, Singularity, and AWS Batch.

Get started using the Nextstrain CLI by reading the documentation, which includes installation and usage information.

If you'd like to contribute to development, the development docs should help you get going. We're glad you'd like to contribute!

If you need help (or just want to say hi!), open an issue or send us an email to hello@nextstrain.org.

Project links

Key dates

PyPI data
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  • Released:
Latest release

6 maintainers

PyPI data
Data sourced directly from PyPI's database.
Avatar for huddlej from gravatar.com huddlej Avatar for jameshadfield from gravatar.com jameshadfield Avatar for nextstrain-bot from gravatar.com nextstrain-bot
+3 more Avatar for rneher from gravatar.com rneher Avatar for trvrb from gravatar.com trvrb Avatar for victorlin0 from gravatar.com victorlin0

Credits

Author: Thomas Sibley

License

MIT License (MIT)

Requires

Python >=3.10

Provides Extra

dev

Classifiers

Report project as malware

Metadata

Project links

Key dates

PyPI data
Data sourced directly from PyPI's database.
  • Released:
Latest release

6 maintainers

PyPI data
Data sourced directly from PyPI's database.
Avatar for huddlej from gravatar.com huddlej Avatar for jameshadfield from gravatar.com jameshadfield Avatar for nextstrain-bot from gravatar.com nextstrain-bot
+3 more Avatar for rneher from gravatar.com rneher Avatar for trvrb from gravatar.com trvrb Avatar for victorlin0 from gravatar.com victorlin0

Credits

Author: Thomas Sibley

License

MIT License (MIT)

Requires

Python >=3.10

Provides Extra

dev

Classifiers

Report project as malware

Release files for nextstrain-cli 11.1.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for nextstrain-cli 11.1.0
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nextstrain_cli-11.1.0.tar.gz 173.9 kB Details

Built distribution (wheel)

Table of built distributions (wheels) for nextstrain-cli 11.1.0
File Interpreter ABI Platform
nextstrain_cli-11.1.0-py3-none-any.whl 206.1 kB Python 3 none any Details

Total release size: 380.0 kB

Release files / nextstrain_cli-11.1.0.tar.gz

Download URL nextstrain_cli-11.1.0.tar.gz
Size 173.9 kB
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Release files / nextstrain_cli-11.1.0-py3-none-any.whl

Download URL nextstrain_cli-11.1.0-py3-none-any.whl
Size 206.1 kB
Tags Python 3
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11.1.0 This release

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11.0.0

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10.5.0

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