npc_shields
Tools for Neuropixels probe insertion into SHIELD implants: providing suggested targets, recording actual insertions, storing notes.
Insertion record widget
The main purpose of this repository is to provide a notebook widget for recording the locations of probe insertions during an ecephys experiment:
Creating new implant drawings
export 2D view of 3D model
- get a .sldpart CAD model from MPE
- open in Solidworks
- rotate the view to face the top of the implant, matching the view from the rig scope
- Save As -> .dxf
- check "current" view only
edit 2D drawing for widget
- open a copy of one of the existing .svg drawings in Inkscape/Illustrator, to use the same page size and colors
- add the new .dxf file
- if the lines are too thick to see any detail, change them to 1pt for now
- resize the new drawing to fill the page, like the existing drawing
- with the two drawings side by side, update the new drawing to match:
- the outline is fragmented and needs to be joined together so a white fill can be applied
- holes that have straight edges will need joining to be fill-able
- circular holes should already be fill-able
- check the CAD model for probe-letter designations (A1, A2, B1, ...)
- when finished, export as .svg
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
npc_shields-0.1.15.tar.gz
(289.1 kB
view details)
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
npc_shields-0.1.15-py3-none-any.whl
(294.4 kB
view details)
File details
Details for the file npc_shields-0.1.15.tar.gz.
File metadata
- Download URL: npc_shields-0.1.15.tar.gz
- Upload date:
- Size: 289.1 kB
- Tags: Source
- Uploaded using Trusted Publishing? Yes
- Uploaded via:
pdm/2.26.6 CPython/3.12.3 Linux/6.14.0-1017-azure
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
a95476ec2d46beaad1be309e44228ac46cb0a36e75acfbea60481d8b595f076a
|
|
| MD5 |
46ac332807eef31ba0e70c9c7b6e7735
|
|
| BLAKE2b-256 |
7a5a3c5a252b702bf3fa05be45f4cee38d6bb34ec845edd04eb70abc2870ea1e
|
File details
Details for the file npc_shields-0.1.15-py3-none-any.whl.
File metadata
- Download URL: npc_shields-0.1.15-py3-none-any.whl
- Upload date:
- Size: 294.4 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? Yes
- Uploaded via:
pdm/2.26.6 CPython/3.12.3 Linux/6.14.0-1017-azure
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
ba9624a12e10630e886168f288f8a890eb3c951c1a562da8beb8563876629a37
|
|
| MD5 |
5098aeb969a0ee702c32f8036bda0323
|
|
| BLAKE2b-256 |
d70a7bc543af98e1e4c241b571e847afd078cc004b6b3f505b278ff726fc9336
|