Skip to main content

Pipemake: A pipeline creation tool using Snakemake

Project description

Stable version Documentation Status Continuous integration status Coverage conda Conda Upload PyPI Upload LICENSE

Pipemake

Pipemake is a lightweight, flexible, and easy-to-use tool for creating and managing Snakemake pipelines. It was designed with two primary goals:

  1. Provide a collection of pre-built and easy to modify bioinformatic pipelines with an enphasis on genomics and social behavior analysis

  2. Provide a user-friendly interface for creating and managing pipelines with minimal programming experience

Getting Pipemake

Mamba

conda install -n base -c conda-forge mamba
mamba create -c conda-forge -c bioconda -c kocherlab -n pipemake pipemake

Issues

  1. Check the docs.

  2. Search the issues on GitHub or open a new one.

License

Pipemake is licensed under the MIT license. See the LICENSE file for details.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

pipemake-1.1.6.tar.gz (26.7 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

pipemake-1.1.6-py3-none-any.whl (23.8 kB view details)

Uploaded Python 3

File details

Details for the file pipemake-1.1.6.tar.gz.

File metadata

  • Download URL: pipemake-1.1.6.tar.gz
  • Upload date:
  • Size: 26.7 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.0.1 CPython/3.9.21

File hashes

Hashes for pipemake-1.1.6.tar.gz
Algorithm Hash digest
SHA256 100fbaf6dcf224d2cf1724d7d4915995a3f50fd34384676cf17c229aab8c291f
MD5 60f18ab8c458fdb0863f1caead4a36ad
BLAKE2b-256 3c277e6631025005005bb09c009c5dcd23dce7873acb164a96fc878604169221

See more details on using hashes here.

File details

Details for the file pipemake-1.1.6-py3-none-any.whl.

File metadata

  • Download URL: pipemake-1.1.6-py3-none-any.whl
  • Upload date:
  • Size: 23.8 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.0.1 CPython/3.9.21

File hashes

Hashes for pipemake-1.1.6-py3-none-any.whl
Algorithm Hash digest
SHA256 ecfbf19d2e4bc770029a7beee5f00c92ac0b461054302874cbc4ead144b083e4
MD5 56ae51cf5857c882720738e1926db1a7
BLAKE2b-256 853ce85c586f56d02d8d09a521b805e78dc78729a5d6317b4c615461ce4e0a20

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page