Skip to main content

Pipemake: A pipeline creation tool using Snakemake

Project description

Stable version Documentation Status Continuous integration status Coverage conda Conda Upload PyPI Upload LICENSE

Pipemake

Pipemake is a lightweight, flexible, and easy-to-use tool for creating and managing Snakemake pipelines. It was designed with two primary goals:

  1. Provide a collection of pre-built and easy to modify bioinformatic pipelines with an enphasis on genomics and social behavior analysis

  2. Provide a user-friendly interface for creating and managing pipelines with minimal programming experience

Getting Pipemake

Mamba

conda install -n base -c conda-forge mamba
mamba create -c conda-forge -c bioconda -c kocherlab -n pipemake pipemake

Issues

  1. Check the docs.

  2. Search the issues on GitHub or open a new one.

License

Pipemake is licensed under the MIT license. See the LICENSE file for details.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

pipemake-1.2.0.tar.gz (27.1 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

pipemake-1.2.0-py3-none-any.whl (24.0 kB view details)

Uploaded Python 3

File details

Details for the file pipemake-1.2.0.tar.gz.

File metadata

  • Download URL: pipemake-1.2.0.tar.gz
  • Upload date:
  • Size: 27.1 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.1.0 CPython/3.9.21

File hashes

Hashes for pipemake-1.2.0.tar.gz
Algorithm Hash digest
SHA256 5a4b1d19cfa40466f46844b8cd7ad49e268c959b00af6a0070c9683f2710854b
MD5 5954ee1bd2cb308ec8ee3d915e1842fd
BLAKE2b-256 64ea98914f85bc5842004e75bc64cc484d95e744589e0b384ab5b087cb237e46

See more details on using hashes here.

File details

Details for the file pipemake-1.2.0-py3-none-any.whl.

File metadata

  • Download URL: pipemake-1.2.0-py3-none-any.whl
  • Upload date:
  • Size: 24.0 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.1.0 CPython/3.9.21

File hashes

Hashes for pipemake-1.2.0-py3-none-any.whl
Algorithm Hash digest
SHA256 4565226f855c4064985b3cf7a8a39cd9da74f7c2325e722fa64d7f625e929d33
MD5 a2df0251ccca4102e4eee480c7a85684
BLAKE2b-256 9f5dfdbeb97d5e01a2eb68f58d5ed1a4d3e287df3df03ee70d32001c8f6d2f92

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page