Package for structuring gene fusions
Project description
py-gene-fusions
Base Package for Fusion Curation
Installation
To install py-gene-fusions:
pip install py-gene-fusions
For a development install, we recommend using Pipenv. See the pipenv docs for direction on installing pipenv in your compute environment.
Once installed, from the project root dir, just run:
pipenv lock
pipenv sync
Init coding style tests
Code style is managed by flake8 and checked prior to commit.
We use pre-commit to run conformance tests.
This ensures:
- Check code style
- Check for added large files
- Detect AWS Credentials
- Detect Private Key
Before first commit run:
pre-commit install
Running unit tests
Running unit tests is as easy as pytest.
pipenv run pytest
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file py-gene-fusions-0.0.3.tar.gz.
File metadata
- Download URL: py-gene-fusions-0.0.3.tar.gz
- Upload date:
- Size: 3.9 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.4.2 importlib_metadata/4.6.3 pkginfo/1.7.1 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.0 CPython/3.9.6
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
497ca818409ea8c31f099127ce14a25b729edc3f58fe80688204cbfe9879f965
|
|
| MD5 |
1ec700fb8037bd9a9f5d3442d2abb69d
|
|
| BLAKE2b-256 |
55f4b2df1c558e4e2c2d7f5dbd41ef49ef607a101379b0e9b80b18a5f85b0d16
|
File details
Details for the file py_gene_fusions-0.0.3-py3-none-any.whl.
File metadata
- Download URL: py_gene_fusions-0.0.3-py3-none-any.whl
- Upload date:
- Size: 4.1 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.4.2 importlib_metadata/4.6.3 pkginfo/1.7.1 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.0 CPython/3.9.6
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
b0fad9ad06055a2b64df392f0bcbb5e2c4688c255c4c47fc67190af4ea5af074
|
|
| MD5 |
8b700465636caa7b7c956c6bae678f6a
|
|
| BLAKE2b-256 |
4e74b6793ca89c574576862caf82e3e1fd9037ff416541803210434d268ab5d9
|
