Nipype 1 Tasks for Pydra
Pydra is a redesign of the Nipype dataflow engine, and the core of the emerging Nipype 2 ecosystem.
This is a task package, a set of Pydra Tasks that inhabits the
pydra.tasks.* namespace, to ease wrapping Nipype 1 Interfaces.
Additional tools for migrating from Nipype 1 to Pydra may find their home here.
Installation
pip install pydra-nipype1
Usage
from pydra.tasks.nipype1.utils import Nipype1Task
from nipype.interfaces import fsl
thresh = Nipype1Task(fsl.Threshold())
res = thresh(in_file=fname, thresh=0.5)
For developers
Install repo in developer mode from the source directory. It is also useful to install pre-commit to take care of styling via black:
pip install -e .[dev]
pre-commit install
Release files for pydra-nipype1 0.3.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| pydra_nipype1-0.3.0.tar.gz | 7.4 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| pydra_nipype1-0.3.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 16.3 kB
Release files / pydra_nipype1-0.3.0.tar.gz
| Download URL | pydra_nipype1-0.3.0.tar.gz |
|---|---|
| Size | 7.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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Release files / pydra_nipype1-0.3.0-py3-none-any.whl
| Download URL | pydra_nipype1-0.3.0-py3-none-any.whl |
|---|---|
| Size | 9.0 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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| Uploaded via |
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