pytest-reana 0.95.0a10

Pytest fixtures for REANA.

pytest-REANA

About

pytest-REANA is a component of the REANA reusable and reproducible research data analysis platform. It provides pytest fixtures and test utilities.

Deprecated. Starting with this release, the fixtures and helpers previously shipped here live in the libraries that own them:

• REANA-Commons-coupled and pure fixtures, plus make_mock_api_client, are exported from reana_commons.testing and auto-loaded via reana-commons[tests].
• Database-coupled fixtures are exported from reana_db.testing and auto-loaded via reana-db[tests].

Existing imports from pytest_reana.fixtures and pytest_reana.test_utils continue to work but emit a DeprecationWarning. New projects should depend on reana-commons[tests] and/or reana-db[tests] instead of pytest-reana. The package will be archived once the deprecation cycle ends.

Features

• pytest fixtures (now provided by reana-commons[tests] and reana-db[tests])
• mocking OpenAPI client with request format validation
• mocking Advanced Message Queuing Protocol consumers and producers
• mocking Celery tasks
• mocking file system workspace access
• mocking database access

Usage

The detailed information on how to install and use REANA can be found in docs.reana.io.

Useful links

• REANA project home page
• REANA user documentation
• REANA user support forum
• pytest-REANA releases
• pytest-REANA developer documentation
• pytest-REANA known issues
• pytest-REANA source code

Changelog

0.9.2 (2023-11-30)

• Changes CI to use the stable release of Python 3.12.

0.9.1 (2023-09-26)

• Adds support for Python 3.12.
• Changes apispec dependency version in order to be compatible with PyYAML v6.
• Fixes container image fixtures to be Podman-compatible.
• Fixes Kombu documentation linking.

0.9.0 (2022-12-13)

• Adds fixture providing example of user secrets needed for Kerberos tests.
• Adds support for Python 3.11.
• Fixes location of Celery docs for ReadTheDocs pages.
• Removes hard-dependency on black code formatter version.

0.8.1 (2022-01-05)

• Adds support for Python 3.10.

0.8.0 (2021-11-22)

• Adds nested Yadage workflow specification fixture.
• Adds empty workflow workspaces for sample workflows by default.
• Adds internal representation of a scatter-gather Snakemake workflow fixture.
• Changes tmp_shared_volume_path fixture to be configurable through environment variable.
• Changes fixtures to run with the full workspace path stored in the database.
• Removes support for Python 2.

0.7.2 (2021-07-02)

• Changes internal dependencies to remove click.

0.7.1 (2021-03-17)

• Adds support for Python 3.9.
• Fixes minor code warnings.
• Fixes installation by upgrading REANA-DB version.

0.7.0 (2020-10-20)

• Adds new __reana database schema for db fixture.
• Fixes a problem related to duplicated database session.
• Changes code formatting to respect black coding style.
• Changes documentation to single-page layout.

0.6.0 (2019-12-19)

• Adds fixtures for secrets store.
• Centralises test requirements.
• Adds Python 3.8 support.

0.5.0 (2019-04-16)

• Makes workspace path configurable for the sample_workflow_workspace fixture through the path parameter.
• Adds sample_serial_workflow_in_db fixture.
• Exposes previously hidden sample_yadage_workflow_in_db fixture.
• Adds missing database session close in session fixture.
• Adds helpers to represent starting and requeueing job conditions, sample_condition_for_starting_queued_workflows and sample_condition_for_requeueing_workflows.

0.4.1 (2018-11-06)

• Adds directory including sample workspace data.

0.4.0 (2018-11-06)

• Initial public release.