Plugin to use Cryoef program within the Scipion framework
Project description
This plugin provide a wrapper around cryoEF program.
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Installation
You will need to use 3.0+ version of Scipion to be able to run these protocols. To install the plugin, you have two options:
- Stable version
scipion installp -p scipion-em-cryoef
Developer’s version
- download repository
git clone https://github.com/scipion-em/scipion-em-cryoef.git
- install
scipion installp -p path_to_scipion-em-cryoef --devel
CryoEF binaries will be installed automatically with the plugin, but you can also link an existing installation. Default installation path assumed is software/em/cryoEF-1.1.0, if you want to change it, set CRYOEF_HOME in scipion.conf` file to the folder where the cryoEF is installed. To check the installation, simply run the following Scipion test:
scipion test cryoef.tests.test_protocols_cryoef.TestCryoEF
Supported versions
1.1.0
Protocols
- orientation analysis
Detailed manual can be found in software/em/cryoEF-1.1.0/cryoEF_v1.1.0_manual.pdf
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| Filename, size | File type | Python version | Upload date | Hashes |
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| Filename, size scipion-em-cryoef-3.0.12.tar.gz (26.9 kB) | File type Source | Python version None | Upload date | Hashes View |
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