High-level helpers for PubMed search, metadata & full-text retrieval.
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searchpubmed
A Python package for searching PubMed and retrieving article metadata via the NCBI E-utilities (ESearch, ESummary, EFetch, ELink).
Features
- Perform complex PubMed searches with boolean operators
- Batch retrieval of PubMed IDs (PMID) and conversion to PMCIDs
- Fetch detailed article metadata (title, abstract, authors, journal, publication date)
- Configurable rate-limiting to comply with NCBI usage policies
- Returns results as pandas DataFrames for seamless analysis
License
This project is licensed under the Apache License 2.0. See the LICENSE file for details.
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