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The SolveBio Python client

Project description

[![Build Status](https://travis-ci.org/solvebio/solvebio-python.svg?branch=master)](http://travis-ci.org/solvebio/solvebio-python)

SolveBio Python Client

This is the SolveBio Python package and command-line interface (CLI). This module has been tested on Python 2.6+, Python 3.1+ and PyPy.

This version of the Python Client is compatible with Vault-based datasets only (released on July 28th, 2017).

Developer documentation is available at [docs.solvebio.com](https://docs.solvebio.com). For more information about SolveBio visit [www.solvebio.com](https://www.solvebio.com).

Dependencies (Ubuntu)

When installing SolveBio on Ubuntu (version 14 and up), you may need the following dependencies:

  • libgnutls-dev
  • libcurl4-gnutls-dev

To install them, run:

sudo apt-get install libcurl4-gnutls-dev libgnutls-dev

Installation & Setup

Install solvebio using pip:

pip install solvebio

For interactive use, we recommend installing IPython and gnureadline:

pip install ipython pip install gnureadline

To log in, type:

solvebio login

Enter your SolveBio credentials and you should be good to go!

Automatic Installer (Python 2.x only)

NOTE: The following installer works for Python 2.x only.

Open your terminal and paste the following command:

curl -skL install.solvebio.com/python | bash

Install from Git

pip install -e git+https://github.com/solvebio/solvebio-python.git#egg=solve

Development

git clone https://github.com/solvebio/solvebio-python.git cd solve-python/ python setup.py develop

To run tests use nosetest:

nosetests solvebio.test.test_dataset

Or install tox and run:

pip install tox tox

Support

Developer documentation is available at [docs.solvebio.com](https://docs.solvebio.com).

If you experience problems with this package, please [create a GitHub Issue](https://github.com/solvebio/solvebio-python/issues).

For all other requests, please [email SolveBio Support](mailto:support@solvebio.com).

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Filename, size & hash SHA256 hash help File type Python version Upload date
solvebio-2.7.0-py2-none-any.whl (2.8 MB) Copy SHA256 hash SHA256 Wheel py2 Sep 11, 2018
solvebio-2.7.0.tar.gz (2.3 MB) Copy SHA256 hash SHA256 Source None Sep 11, 2018

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