Utilities for Tellurium
Project description
# Utilities for Tellurium
This repo includes a number of useful utilities for Tellurium users. Modules are described below.
odePrint
This provides a number of methods convert SBML into the equations representing the model.
plotting
This modules contains a variety of additional plotting methods, include 3D, heatmaps for control coefficients, and ascii plots.
prettyTabular
This modules provides two methods to display fluxes and concentrations in a neat tabular format.
buildNetworks
This modules provides two methods to build a linear chain of reactions using either mass-action or Michaelis-Menten kinetics or a random network using uniuni, unibi, biuni or bibi mass-action governed reactions.
fitter This module fits model parameters to observational data.
- Installation
pip install tellurium
Or from tellurium you can use te.installPackage (‘teUtils’)
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