Common Code
Code that both LiveCellAnalysis and smFISH (or others) use and doesn't get major changes goes here.
Installation (Ubuntu)
pip install tllab_common
or editable:
git clone git@github.com:Lenstralab/tllab_common.git
pip install -e tllab_common/ --user
Installation of Maven and OpenJDK
Running the livecell_track_movies pipeline with segmentation using trackmate requires OpenJDK and Maven. If not installed already you will have to install them manually and make sure mvn is on the path.
2 maintainers
Metadata
2 maintainers
Release files for tllab-common 2026.10.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| tllab_common-2026.10.0.tar.gz | 48.7 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| tllab_common-2026.10.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 101.8 kB
Release files / tllab_common-2026.10.0.tar.gz
| Download URL | tllab_common-2026.10.0.tar.gz |
|---|---|
| Size | 48.7 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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No |
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twine/6.2.0 CPython/3.12.9
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Release files / tllab_common-2026.10.0-py3-none-any.whl
| Download URL | tllab_common-2026.10.0-py3-none-any.whl |
|---|---|
| Size | 53.1 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.12.9
|
