xpore is a python package for Nanopore data analysis of differential RNA modifications.
Project description
xPore is a Python package for identification and quantification of differential RNA modifications from direct RNA sequencing.
Installation
xPore requires Python3. To install the latest release with PyPI (recommended), run
$ pip install xpore
Documentation
Please refer to our xPore documentation (https://xpore.readthedocs.io) for additional information, a quick start guide, and details on the data processing and output file format.
xPore is described in details in a preprint (https://www.biorxiv.org/content/10.1101/2020.06.18.160010v1)
Release History
The current release is xPore v2.0.
Please refer to the github release history for previous releases: https://github.com/GoekeLab/xpore/releases
Citing xPore
If you use xPore in your research, please cite
Contact
xPore is maintained by Ploy N. Pratanwanich, Yuk Kei Wan and Jonathan Goeke from the Genome Institute of Singapore, A*STAR.
If you want to contribute, please leave an issue.
Thank you!
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