Bio2BEL ExPASy 
This repository downloads and parses the enzyme classes from the ExPASy ENZYME database
Installation 
bio2bel_expasy can be installed easily from PyPI with the following code in your favorite terminal:
$ python3 -m pip install bio2bel_expasyor from the latest code on GitHub with:
$ python3 -m pip install git+https://github.com/bio2bel/expasy.git@masteror check the installation instructions.
Setup
ExPASy can be downloaded and populated from either the Python REPL or the automatically installed command line utility.
Python REPL
>>> import bio2bel_expasy
>>> expasy_manager = bio2bel_expasy.Manager()
>>> expasy_manager.populate()Command Line Utility
bio2bel_expasy populateProgrammatic Interface
To enrich the proteins in a BEL Graph with their enzyme classes, use:
>>> from bio2bel_expasy import enrich_proteins >>> graph = ... # get a BEL graph >>> enrich_proteins(graph)
Citations
Gasteiger, E., et al. (2003). ExPASy: The proteomics server for in-depth protein knowledge and analysis. Nucleic Acids Research, 31(13), 3784–8.
1 maintainer
Metadata
1 maintainer
Release files for bio2bel-expasy 0.2.0
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| File | Size | Uploaded | Provenance | |
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| bio2bel_expasy-0.2.0.tar.gz | 20.4 kB | Without provenance | Details |
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| bio2bel_expasy-0.2.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 35.9 kB
Release files / bio2bel_expasy-0.2.0.tar.gz
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Release files / bio2bel_expasy-0.2.0-py3-none-any.whl
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| Size | 15.6 kB |
| Tags | Python 3 |
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