5 files were added to this release more than 14 days after its initial publication. Inspect the release files before installing.
khmer
Welcome to khmer: k-mer counting, filtering, and graph traversal FTW!
The official source code repository is at https://github.com/dib-lab/khmer and project documentation is available online at http://khmer.readthedocs.io. See http://khmer.readthedocs.io/en/stable/introduction.html for an overview of the khmer project.
Getting help
See http://khmer.readthedocs.io/en/stable/user/getting-help.html for more details, but in brief:
first point of contact when looking for help: https://github.com/dib-lab/khmer/issues
mailing list for discussion: http://lists.idyll.org/listinfo/khmer
mailing list for announcements: http://lists.idyll.org/listinfo/khmer-announce
email contact for project maintainers: khmer-project@idyll.org
Important note: cite us!
khmer is research software, so you should cite us when you use it in scientific publications! Please see the CITATION file for citation information.
The khmer library is a project of the Lab for Data Intensive Biology at UC Davis, and includes contributions from its members, collaborators, and friends.
Quick install
pip install khmer pytest --pyargs khmer -m 'not known_failing and not jenkins and not huge and not linux'
See https://khmer.readthedocs.io/en/stable/user/install.html for more detailed installation instructions.
Contributing
We welcome contributions to khmer from the community! If you’re interested in modifying khmer or contributing to its ongoing development see https://khmer.readthedocs.io/en/stable/dev/getting-started.html.
4 maintainers
Metadata
4 maintainers
Release files for khmer 2.1.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Files added late
5 files were uploaded more than 14 days after the first file in this release.
While project maintainers occasionally add legitimate files to an existing release, late additions can also indicate a security compromise.
We recommend inspecting the release files before installing.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| khmer-2.1.1.tar.gz | 8.5 MB | Details |
Built distributions (wheels)
| File | Reset | |||
|---|---|---|---|---|
| khmer-2.1.1-cp37-cp37m-manylinux1_x86_64.whl | CPython 3.7 | CPython 3.7 pymalloc | Linux glibc 2.5+ x86-64 | Details |
| khmer-2.1.1-cp36-cp36m-manylinux1_x86_64.whl | CPython 3.6 | CPython 3.6 pymalloc | Linux glibc 2.5+ x86-64 | Details |
| khmer-2.1.1-cp35-cp35m-manylinux1_x86_64.whl | CPython 3.5 | CPython 3.5 pymalloc | Linux glibc 2.5+ x86-64 | Details |
| khmer-2.1.1-cp27-cp27mu-manylinux1_x86_64.whl | CPython 2.7 | CPython 2.7 pymalloc wide-unicode | Linux glibc 2.5+ x86-64 | Details |
| khmer-2.1.1-cp27-cp27m-manylinux1_x86_64.whl | CPython 2.7 | CPython 2.7 pymalloc | Linux glibc 2.5+ x86-64 | Details |
Total release size: 65.8 MB
Release files / khmer-2.1.1.tar.gz
| Download URL | khmer-2.1.1.tar.gz |
|---|---|
| Size | 8.5 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
Release files / khmer-2.1.1-cp37-cp37m-manylinux1_x86_64.whl
File added late
This file was uploaded more than 14 days after the first file in this release.
While project maintainers occasionally add legitimate files to an existing release, late additions can also indicate a security compromise.
We recommend inspecting the release file before installing.
| Download URL | khmer-2.1.1-cp37-cp37m-manylinux1_x86_64.whl |
|---|---|
| Size | 11.5 MB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Linux glibc 2.5+ x86-64 |
|
SHA-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
Release files / khmer-2.1.1-cp36-cp36m-manylinux1_x86_64.whl
File added late
This file was uploaded more than 14 days after the first file in this release.
While project maintainers occasionally add legitimate files to an existing release, late additions can also indicate a security compromise.
We recommend inspecting the release file before installing.
| Download URL | khmer-2.1.1-cp36-cp36m-manylinux1_x86_64.whl |
|---|---|
| Size | 11.5 MB |
| Tags | CPython 3.6 CPython 3.6 pymalloc Linux glibc 2.5+ x86-64 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
Release files / khmer-2.1.1-cp35-cp35m-manylinux1_x86_64.whl
File added late
This file was uploaded more than 14 days after the first file in this release.
While project maintainers occasionally add legitimate files to an existing release, late additions can also indicate a security compromise.
We recommend inspecting the release file before installing.
| Download URL | khmer-2.1.1-cp35-cp35m-manylinux1_x86_64.whl |
|---|---|
| Size | 11.5 MB |
| Tags | CPython 3.5 CPython 3.5 pymalloc Linux glibc 2.5+ x86-64 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
Release files / khmer-2.1.1-cp27-cp27mu-manylinux1_x86_64.whl
File added late
This file was uploaded more than 14 days after the first file in this release.
While project maintainers occasionally add legitimate files to an existing release, late additions can also indicate a security compromise.
We recommend inspecting the release file before installing.
| Download URL | khmer-2.1.1-cp27-cp27mu-manylinux1_x86_64.whl |
|---|---|
| Size | 11.5 MB |
| Tags | CPython 2.7 CPython 2.7 pymalloc wide-unicode Linux glibc 2.5+ x86-64 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
Release files / khmer-2.1.1-cp27-cp27m-manylinux1_x86_64.whl
File added late
This file was uploaded more than 14 days after the first file in this release.
While project maintainers occasionally add legitimate files to an existing release, late additions can also indicate a security compromise.
We recommend inspecting the release file before installing.
| Download URL | khmer-2.1.1-cp27-cp27m-manylinux1_x86_64.whl |
|---|---|
| Size | 11.5 MB |
| Tags | CPython 2.7 CPython 2.7 pymalloc Linux glibc 2.5+ x86-64 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
