76 projects
embiggen
🍇 Embiggen is the Python Graph Representation learning, Prediction and Evaluation module processing submodule of the GRAPE library.
ensmallen
🍇 Ensmallen is the Rust/Python high-performance graph processing submodule of the GRAPE library.
compress-json
The missing Python utility to read and write large compressed JSONs.
dict-hash
Simple python tool to hash dictionaries using both default hash and sha256.
environments-utils
Utilities to identify which environments is your python script running within.
ddd-subplots
Python package making it easier to handle mixed 3d and 2d subplots.
grape
🍇 GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluations.
downloaders
Python package to handle download of multiple types of files.
sanitize-ml-labels
Simple python package to sanitize in a standard way ML-related labels.
enpkg-interfaces
Module providing interfaces for the ENPKG project.
userinput
Simple python package to handle cli user input.
random-italian-person
Python package to generate an Italian person randomly.
italian-csv-type-prediction
Attempt at predicting common types in CSVs about Italian people and places using Spacy NLP tool.
dictances
Distances and divergences between distributions implemented in python.
pubmed-embedding
A tool to work with pre-computed large pubmed embedding.
plot-keras-history
A simple python package to print a keras NN training history.
pygifsicle
Python package wrapping the gifsicle library for editing and optimizing gifs.
support-developer
Package designed to centralize messages to support developers development work.
ringbell
Python package to play a sound when a task completes.
keras-ding
Keras callback for playing a sound when training is complete.
extra-keras-metrics
Additional metrics integrated with the TensorFlow and Keras NN library.
transpose-dict
Small customizable multiprocessing multi-proxy crawler.
deflate-dict
Python package to deflate and re-inflate dictionaries.
silence-tensorflow
Simple python package to shut up Tensorflow warnings and logs.
barplots
Python package to easily make barplots from multi-indexed dataframes.
ucsc-genomes-downloader
Python package to quickly download genomes from the UCSC.
keras-bed-sequence
Lazily one-hot encoding bed sequences using Keras Sequence.
encodeproject
Python package wrapping some of the encode project APIs.
epigenomic-dataset
Python package wrapping ENCODE epigenomic data for a number of reference cell lines.
memory-time-tracker
Python tool to track the memory and time requirements of software.
golomb-coding
Didactical python package implementing Golomb coding and decoding.
minimal-binary-coding
Didactical python package implementing minimal binary coding and decoding.
unary-coding
Didactical python package implementing coding and decoding for unary and inverted unary.
keras-mixed-sequence
Lazily loading mixed sequences using Keras Sequence, focused on multi-task models.
minimize-bibfile
Python package to identify and remove duplicated or near-duplicated bib entries.
conservation-scores-dataset
Python package providing retrieval for conservation scores.
crr-labels
Python package wrapping over FANTOM and Roadmap labels for cis regulatory regions.
ensmallen-graph
setup-python-package
A python package that helps you create a python package.
csv-trimming
Package python to remove common ugliness from a csv-like file
notipy-me
A simple python package to send you and any other receiver an email when a portion of code is done running.
random-dict
Simple python package to generate random dictionaries of given types.
keras-synthetic-genome-sequence
Python package to lazily generate synthetic genomic sequences for training od Keras models.
validate-version-code
Python package to validate version codes.
pybwtool
Python wrapper for the bwtool library.
keras-biological-gaps-sequence
Python package to generate on-hot encoded biological gaps to use for training and prediction.
ugly-csv-generator
Python package to generate ugly real-looking csvs.
random-csv-generator
Tool for rendering plausible real-life csv data.
gaussian-process
Wrapper for sklearn.gp_minimize for a simpler parameter specification using nested dictionaries.
holdouts-generator
Simple python package to generate and cache both random and chromosomal holdouts with arbitrary depth.
hpo-downloader
Python package to download HPO annotations and mapping to Uniprot ID and AC and CAFA4 IDs.
histograms
Python package to easily make histograms from multi-indexed dataframes.
extra-keras-utils
Python package collecting commonly used snippets for the Keras library.
approximations
Python package containing approximations of various NP problems.
prefix-codes
Python package implementing a number of prefix codes alongside their utilities.
reduced-binary-coding
Python package implementing reduced binary coding.
gamma-coding
Python package implementing gamma coding.
delta-coding
Python package implementing delta coding.
truncated-binary-encoding
Python package implementing truncated binary encoding.
nibble-coding
Python package implementing nibble and byte coding.
elias-fano
Python package implementing an educational version of Elias-Fano succint structure. This package is not thought for efficient data storing as the superior and inferior data vectors are implemented as strings to show the results step by step for educational purposes.
interpolative-coding
Python package for binary interpolative coding.
levenshtein-coding
Python package implementing Levenshtein coding.
omega-coding
Python package implementing omega coding.
miur-daad-balancing
Testing dataset balancing techniques from previous works.
auto-tqdm
Wrapper over tqdm for automatically handle switch between jupyter and cli and tunes bar to my liking (automatic resizing, stronger smoothing and tuning for erratic iterations).
fasta-one-hot-encoder
Simple python to lazily one-hot encode fasta files using multiple processes, either single bases or considering arbitrary kmers.
udbnn
Experiment to determine whetever a large batch-size can be helpful with extremely umbalanced datasets.
boston-housing-experiment
MLP experiment.
arrp-dataset
Simple python tool to create dataset for arrps.
training-results-visualizer
Small customizable multiprocessing multi-proxy crawler.
unimi_unsubscribe
Simple package to stop receiving annoying emails from Unimi.
pyadigraph
Pyadigraph turns your networkx into Adigraph latex package.
tinycrawler
Small customizable multiprocessing multi-proxy crawler.
zipf_classifier
A package to create a deterministic classifier based on Zipf law
zipf
A package to create and work with zipf distributions
