pyensembl

Last released Aug 17, 2023

Python interface to ensembl reference genome metadata

isovar

Last released Aug 1, 2023

Determine mutant protein sequences from RN using assembly around variants

gtfparse

Last released Dec 22, 2022

GTF Parsing

datacache

Last released Dec 20, 2022

Helpers for transparently downloading datasets

varcode

Last released Nov 29, 2022

Variant annotation in Python

fancyimpute

Last released Oct 21, 2021

Matrix completion and feature imputation algorithms

mhctools

Last released Oct 9, 2020

Python interface to running command-line and web-based MHC binding predictors

vaxrank

Last released Aug 19, 2020

Mutant peptide ranking for personalized cancer vaccines

serializable

Last released Oct 27, 2019

Base class with serialization helpers for user-defined Python objects

openvax_project_template

Last released Mar 1, 2018

Project template for OpenVax Python projects

topiary

Last released Feb 26, 2018

Predict cancer epitopes from cancer sequence data

sercol

Last released Feb 26, 2018

Rich collection class with grouping and filtering helpers

mhcnames

Last released Feb 26, 2018

Python library for MHC nomenclature parsing

pepdata

Last released Feb 26, 2018

Immunological peptide datasets and amino acid properties

typechecks

Last released Feb 23, 2018

Helper functions for runtime type checking

pepnet

Last released Jul 19, 2017

Neural networks for amino acid sequences