Helpers for transparently downloading datasets

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  • License: Apache Software License (http://www.apache.org/licenses/LICENSE-2.0.html)
  • Author: Alex Rubinsteyn
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DataCache

Helpers for transparently downloading datasets

API

  • fetch_file(downloadurl, filename = _None, decompress = False, subdir = None)
  • fetch_and_transform(transformedfilename, transformer, loader, source_filename, source_url, subdir = _None)
  • fetch_fasta_dict(downloadurl, filename = _None, subdir = None)
  • fetch_fasta_db(tablename, download_url, fasta_filename = _None, key*column = *'id', value_column = 'seq', subdir = _None)
  • fetch_csv_db(tablename, download_url, csv_filename = _None, subdir = None, **pandas_kwargs)

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Avatar for hammerlab from gravatar.com hammerlab Avatar for iskander from gravatar.com iskander Avatar for openvax from gravatar.com openvax Avatar for tavinathanson from gravatar.com tavinathanson Avatar for timodonnell from gravatar.com timodonnell

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  • License: Apache Software License (http://www.apache.org/licenses/LICENSE-2.0.html)
  • Author: Alex Rubinsteyn
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