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Helpers for transparently downloading datasets

Project description

Helpers for transparently downloading datasets


  • fetch_file(download_url, filename = None, decompress = False, subdir = None)
  • fetch_and_transform(transformed_filename, transformer, loader, source_filename, source_url, subdir = None)
  • fetch_fasta_dict(download_url, filename = None, subdir = None)
  • fetch_fasta_db(table_name, download_url, fasta_filename = None, key_column = ‘id’, value_column = ‘seq’, subdir = None)
  • fetch_csv_db(table_name, download_url, csv_filename = None, subdir = None, **pandas_kwargs)

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