46 projects
mpl-data-cast
convert and transfer data to network shares
dclab
Library for real-time deformability cytometry (RT-DC)
dcor-control
CLI for maintaining DCOR installations
ckanext-dc-serve
Serve DC files via GET requests on DCOR
dcoraid
GUI/CLI for managing data on DCOR
shapeout2
User interface for real-time deformability cytometry (RT-DC)
dcor-shared
Functionalities shared by the DCOR CKAN extensions
ckanext-dcor-schemas
Introduces or lifts restrictions (authorization) for managing data and metadata on DCOR
ckanext-dcor-depot
Manages data storage for CKAN/DCOR (import, symlink, etc.)
ckanext-dcor-theme
The DCOR CKAN theme
ckanext-dc-view
Preview DC data in DCOR
ckanext-dc-log-view
View DC data logs on DCOR
chipstream
GUI for DC data postprocessing
dckit
Graphical toolkit for RT-DC data management
igor2
interface for reading binary IGOR files
pyjibe
Graphical user interface for Bio-AFM analysis
nanite
Loading, fitting, and rating AFM force-distance data
dcnum
numerics toolbox for imaging deformability cytometry
nanite-model-sneddon-spher
Sneddon model for AFM analysis in nanite
qpimage
library for manipulating quantitative phase images
afmformats
reading common AFM file formats
bmicro
GUI for Brillouin evaluation
impose
Fit and superimpose shapes from different imaging modalities
hpc-pipeline-code
Blocker for internal Python package
nrefocus
numerical focusing (refocusing, autofocusing) of complex wave fields
qpretrieve
library for phase retrieval from holograms
qpformat
library for opening quantitative phase imaging data
odtbrain
Algorithms for diffraction tomography
bmlab
Library for Brillouin microscopy data analysis
radontea
Collection of algorithms to compute the inverse Radon transform
fcswrite
Write .fcs files (flow cytometry)
drymass
manipulation and analysis of phase microscopy data
dcevent
Placeholder package for internal development
qpsphere
library for analyzing spherical objects in phase imaging
fluigent-sdk
Placeholder for fluigent_sdk by Fluigent
cytoshot
dctag
flimage
library for manipulating fluorescence microscopy series data
cellsino
in-silico sinograms (phase and fluorescence) of cells
cellreel
graphical user interface for refractive index and " + fluorescence tomography
shapelink
Inter-process communication with Shape-In
pyscanfcs
Scientific tool for perpendicular line scanning FCS.
shapeout
User interface for real-time deformability cytometry (RT-DC)
pycorrfit
Scientific tool for fitting correlation curves on a logarithmic plot.
ggf
global geometric factors and corresponding stresses of the optical stretcher
multipletau
A multiple-tau algorithm for Python/NumPy
