Tools for working with Variant Call Format files.
Script and functions for SNP matrix construction
An abstraction layer to run jobs on HPC clusters using Grid Engine, Torque, or locally.
Tools for haploid variant calling with Deep Neural Networks.
A helper tool for running array jobs on an HPC computational node.
Tools to help choosing a reference assembly.
Generate mutated sequence files from a reference genome.
Tools for working with fasta files.