An abstraction layer to run jobs on HPC clusters using Grid Engine, Torque, or locally.
Script and functions for SNP matrix construction
Tools to help choosing a reference assembly.
Generate mutated sequence files from a reference genome.
Tools for working with Variant Call Format files.
Tools for haploid variant calling with Deep Neural Networks.
A helper tool for running array jobs on an HPC computational node.
Tools for working with fasta files.