Skip to main content

Microbiome Screening and COmmunity selection using TOpology

Project description

MiSCoTo is a Python3 tool to explore microbiomes and select minimal communities within them. It uses Answer Set Programming (ASP) to optimize community selection. Inputs: metabolic models, seeds (growth medium) and metabolic targets. Computations can be performed with a set of symbionts or a set of symbionts and a host. In the latter case, targets will be produced by the host, whereas in the former they will be produced by any member of the microbiome. More information on usage and troubleshooting on Github: https://github.com/cfrioux/miscoto

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

Miscoto-2.0.3.tar.gz (15.6 kB view hashes)

Uploaded Source

Built Distribution

Miscoto-2.0.3-py3-none-any.whl (31.6 kB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page