A fast implementation of RuSH (Rule-based sentence Segmenter using Hashing).
Project description
PyRuSH is the python implementation of RuSH (Ru le-based sentence S egmenter using H ashing), which is originally developed using Java. RuSH is an efficient, reliable, and easy adaptable rule-based sentence segmentation solution. It is specifically designed to handle the telegraphic written text in clinical note. It leverages a nested hash table to execute simultaneous rule processing, which reduces the impact of the rule-base growth on execution time and eliminates the effect of rule order on accuracy.
If you wish to cite RuSH in a publication, please use:
Jianlin Shi ; Danielle Mowery ; Kristina M. Doing-Harris ; John F. Hurdle.RuSH: a Rule-based Segmentation Tool Using Hashing for Extremely Accurate Sentence Segmentation of Clinical Text. AMIA Annu Symp Proc. 2016: 1587.
The full text can be found here.
Installation
pip install PyRuSH
How to use
A standalone RuSH class is available to be directly used in your code.
>>> from PyRuSH import RuSH >>> input_str = "The patient was admitted on 03/26/08\n and was started on IV antibiotics elevation" +\ >>> ", was also counseled to minimizing the cigarette smoking. The patient had edema\n\n" +\ >>> "\n of his bilateral lower extremities. The hospital consult was also obtained to " +\ >>> "address edema issue question was related to his liver hepatitis C. Hospital consult" +\ >>> " was obtained. This included an ultrasound of his abdomen, which showed just mild " +\ >>> "cirrhosis. " >>> rush = RuSH('../conf/rush_rules.tsv') >>> sentences=rush.segToSentenceSpans(input_str) >>> for sentence in sentences: >>> print("Sentence({0}-{1}):\t>{2}<".format(sentence.begin, sentence.end, input_str[sentence.begin:sentence.end]))
Spacy Componentized PyRuSH
Start from version 1.0.3, PyRuSH adds Spacy compatible Sentencizer component: PyRuSHSentencizer.
>>> from PyRuSH import PyRuSHSentencizer >>> from spacy.lang.en import English >>> nlp = English() >>> nlp.add_pipe(PyRuSHSentencizer('conf/rush_rules.tsv')))) >>> doc = nlp("This is a sentence. This is another sentence.") >>> print('\n'.join([str(s) for s in doc.sents]))
A Colab Notebook Demo
Feel free to try this runnable Colab notebook Demo
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distributions
Hashes for PyRuSH-1.0.3.6-cp310-cp310-win_amd64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 3147ff8eb29b17ab62ef928628141683a00ae9354f1424233ca76eb1f0f05912 |
|
MD5 | 1862e9c8db25e54a80dca4cd625d3cc7 |
|
BLAKE2b-256 | c80632c57302dbd3ffc73cd956e6fdf72a57d8be061d48236dd0cbb5ff3490b3 |
Hashes for PyRuSH-1.0.3.6-cp310-cp310-musllinux_1_1_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 25fd13887b4d9dab4e346195bf69ec535b9171ce42c8282ee3b0c59658d7f29a |
|
MD5 | c522bc7a980dd53d016e2bf793389bb5 |
|
BLAKE2b-256 | 93d7b30d882f909902500b206acce089acbf7782fb581fad16211463497c9430 |
Hashes for PyRuSH-1.0.3.6-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | e72f4012f687cccb4239008d2d1d3818bc8bca452d6003ebb4321ba4c0c2a047 |
|
MD5 | 470d6816d97cd98fda68eec7ed0aa625 |
|
BLAKE2b-256 | 0b8d310caf8cbabf49125d6d4b9aef6b4859e01aa226f6efa3398b4795c551dc |
Hashes for PyRuSH-1.0.3.6-cp310-cp310-macosx_10_9_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 1f1b18ad7f5ede7ec2b1b3b3464b5033b96e54b0d3bfd605ccf03c5670c352dc |
|
MD5 | 985c3d7e97906829c211a042cf6aa2ec |
|
BLAKE2b-256 | c2e9dae8ea1f78317f9860def4fe691bb072be68b709a86ff5610f8b3c43118c |
Hashes for PyRuSH-1.0.3.6-cp39-cp39-win_amd64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | a9555a13faf2b12af740bc25515e93a1bbf2ffcccd7b26e447b1f009f7373e1f |
|
MD5 | 20b31744c1e616bce8b8c1f8f634c464 |
|
BLAKE2b-256 | 0c92ccebc203d4b579c266f3c2a2c02bc8e388c37618d8128c970845ce6027f8 |
Hashes for PyRuSH-1.0.3.6-cp39-cp39-musllinux_1_1_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 3baf9d4da51d72be19cf95145ecb01567542a1b8b44b0a4c54d2dccf6635acab |
|
MD5 | 733e85fc23084861b0dc0f24819f5eb4 |
|
BLAKE2b-256 | 782b6b1e81651489aab8f4a98748dfea1350e50feaf5117f54e66a6c1525f71a |
Hashes for PyRuSH-1.0.3.6-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 399e5cd49d6eb2cd19afcc7c42247b2a06763143081614712ed30fb7f8cb87ee |
|
MD5 | f7552f6a39ebe4a0483c7acdbb8e60a3 |
|
BLAKE2b-256 | 157de21be8561d7bf7ff5c00799b9acedff6a7639c70d4f1891dcdfeed99d81d |
Hashes for PyRuSH-1.0.3.6-cp39-cp39-macosx_10_9_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 46d1060f005ab036c084d0e195193a51a7f47a05242851cf8dfa9867448a2ae6 |
|
MD5 | a6ea20264a22536e84f7562a35595c52 |
|
BLAKE2b-256 | 94b00307b3493965c8d343abe4f4e82a3ca443cf3294620690ddcd1eea67058d |
Hashes for PyRuSH-1.0.3.6-cp38-cp38-win_amd64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 6d945080f9381482f7e8bd8409c455dc4788f2ed6b54ef1a65f664309281a145 |
|
MD5 | 6035e7e10e2ce398283f89f0fb3c518b |
|
BLAKE2b-256 | b63654bdb4cdf3211258b707fa4a2236c0de49462d493c461a3367b9caf6f768 |
Hashes for PyRuSH-1.0.3.6-cp38-cp38-musllinux_1_1_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 33ffe192d3464fb7b158e6d50e746188eae83f4dfed6bb2effa4dd7745193b41 |
|
MD5 | 6e05a40b0b90d873828c73a0c5718387 |
|
BLAKE2b-256 | 56aa887850c080523ac310c30682c0c4a805db771322d05ceafea0a6910837b4 |
Hashes for PyRuSH-1.0.3.6-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 5008ec0c7e088530ceb7c8aa54a10ea9b151a93203ad070fefe4eab535baa592 |
|
MD5 | 7c45b15d971faa48f28330c7e8138f3c |
|
BLAKE2b-256 | d9965e49bc6fd1a35e46983c6271f46d2e9b7986d6cae7b657cb19c4516df2d3 |
Hashes for PyRuSH-1.0.3.6-cp38-cp38-macosx_11_0_arm64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 6e2001171a8215dfd9f30edf429af30e8e9f9b6b6f3fcc26848307652649f608 |
|
MD5 | 1c9a808878121e30f280cc9e889d0611 |
|
BLAKE2b-256 | 6cfde540c53e1453ca4081eef47b327c3822a5f0032875a88a02ef755f6c2e90 |
Hashes for PyRuSH-1.0.3.6-cp38-cp38-macosx_10_9_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | abd5f70582c1d8134ab9532275a94cc6f378b53b169be96714ecb16af98116d8 |
|
MD5 | c33141cc38dabf0b0b31938d0edffa66 |
|
BLAKE2b-256 | 7780bee6ac828a65eca30511a819e0fb030dba1265417607cabd2ec862da11e1 |
Hashes for PyRuSH-1.0.3.6-cp37-cp37m-win_amd64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 120f54081aa0ad4ded8552ff5e839aa9a4ecb1f87b910de21e7429a0b579d8aa |
|
MD5 | a6f935cf49f58781a12844ca1caba8e0 |
|
BLAKE2b-256 | f63c8b6973fe998cfda3d8567b4fb00e1afb74ad75f02c6dfd98b40dc1d9af26 |
Hashes for PyRuSH-1.0.3.6-cp37-cp37m-musllinux_1_1_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 1deaad7cb8eaccd711a938ba94745c0d8144e40c9d5ece88f3a4dc788d2c3ea9 |
|
MD5 | 1eb52c1a9ed0bad016df5d32cf530ab2 |
|
BLAKE2b-256 | b50c2c7fafbc2c3e5cb3d7aa4820caf9957820d9238b12abac569a672ca6b3a5 |
Hashes for PyRuSH-1.0.3.6-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 61dd56785d82f9b49d15d2bb0f6cf27d58e8fc86fe713733bb44bc59f9fa8fd8 |
|
MD5 | d851f57c0e1b1e87772ead2360db83d1 |
|
BLAKE2b-256 | 70b08b995c6088f9bace8b8517472326a6a37310de2acd1379252b8ff759fb81 |
Hashes for PyRuSH-1.0.3.6-cp37-cp37m-macosx_10_9_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | abe5b230c699458c17f27634ecd7d00d9051290a697551c8f1064f288fad6c84 |
|
MD5 | d026ddcab03026a31dc10039271a30b2 |
|
BLAKE2b-256 | 366e9e1e4ec77c774af8eef6ee8179b5e6b2af9221ba51a3a6f2511194fccf5b |
Hashes for PyRuSH-1.0.3.6-cp36-cp36m-win_amd64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | cba28400530ebfd6980141fbf7f38078b82f937c4bfe7cbf01f5d717098331d2 |
|
MD5 | af86afa64e653b0c5d6352c56e79dce6 |
|
BLAKE2b-256 | f7bd96233b8f7c10b4231f78169ea474a0e3a72a8e45af72d8d450447be930f5 |
Hashes for PyRuSH-1.0.3.6-cp36-cp36m-musllinux_1_1_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 6c19e5aa65d90de88ef156ddd46305e9047faf47e5ed0f71ae45750070ca4e23 |
|
MD5 | 5d681b378881cec939ad67ab4eb0b951 |
|
BLAKE2b-256 | 76bbb03a4cadb0a918af64b96a1101ad2ab275d244c0f663731744ce57ddeeae |
Hashes for PyRuSH-1.0.3.6-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 76579b9072494a1990bb2beea3a0527785b8239b344e84717255c69253032e0f |
|
MD5 | 5b4cc939c76ab43af669a01ed7f9e3cb |
|
BLAKE2b-256 | 94ba2b2ffb75e356686cf5a6b03821337351bc263ef8f4d2e15adab714df71ae |
Hashes for PyRuSH-1.0.3.6-cp36-cp36m-macosx_10_9_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | c2ea1bcc49fc34f4c46db87a9525a92f10f3ca46f6e1e1c781f47359fac1cb49 |
|
MD5 | 712ebe64932b69f650d6327c16c654e8 |
|
BLAKE2b-256 | 03420ea9d58234a32e2bb2ae315101539e5e9ddc99212fff73226dfbda8d19b0 |