A fast implementation of RuSH (Rule-based sentence Segmenter using Hashing).
Project description
PyRuSH is the python implementation of RuSH (Ru le-based sentence S egmenter using H ashing), which is originally developed using Java. RuSH is an efficient, reliable, and easy adaptable rule-based sentence segmentation solution. It is specifically designed to handle the telegraphic written text in clinical note. It leverages a nested hash table to execute simultaneous rule processing, which reduces the impact of the rule-base growth on execution time and eliminates the effect of rule order on accuracy.
If you wish to cite RuSH in a publication, please use:
Jianlin Shi ; Danielle Mowery ; Kristina M. Doing-Harris ; John F. Hurdle.RuSH: a Rule-based Segmentation Tool Using Hashing for Extremely Accurate Sentence Segmentation of Clinical Text. AMIA Annu Symp Proc. 2016: 1587.
The full text can be found here.
Installation
pip install PyRuSH
How to use
A standalone RuSH class is available to be directly used in your code.
>>> from PyRuSH import RuSH >>> input_str = "The patient was admitted on 03/26/08\n and was started on IV antibiotics elevation" +\ >>> ", was also counseled to minimizing the cigarette smoking. The patient had edema\n\n" +\ >>> "\n of his bilateral lower extremities. The hospital consult was also obtained to " +\ >>> "address edema issue question was related to his liver hepatitis C. Hospital consult" +\ >>> " was obtained. This included an ultrasound of his abdomen, which showed just mild " +\ >>> "cirrhosis. " >>> rush = RuSH('../conf/rush_rules.tsv') >>> sentences=rush.segToSentenceSpans(input_str) >>> for sentence in sentences: >>> print("Sentence({0}-{1}):\t>{2}<".format(sentence.begin, sentence.end, input_str[sentence.begin:sentence.end]))
Spacy Componentized PyRuSH
Start from version 1.0.3, PyRuSH adds Spacy compatible Sentencizer component: PyRuSHSentencizer.
>>> from PyRuSH import PyRuSHSentencizer >>> from spacy.lang.en import English >>> nlp = English() >>> nlp.add_pipe(PyRuSHSentencizer('conf/rush_rules.tsv')))) >>> doc = nlp("This is a sentence. This is another sentence.") >>> print('\n'.join([str(s) for s in doc.sents]))
A Colab Notebook Demo
Feel free to try this runnable Colab notebook Demo
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Built Distributions
Hashes for PyRuSH-1.0.4-cp310-cp310-win_amd64.whl
Algorithm | Hash digest | |
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SHA256 | d08cad6eed73486b849b08166a6dc2d9efd1e9be29b2f8baffda273fd84edf35 |
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MD5 | a5d1d56c34d84a9936bf47cfc39d3d5c |
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BLAKE2b-256 | fee3636b022b4e0a9e7922edb3fff20e620ae625980bd9240dc6bbffebc4fca8 |
Hashes for PyRuSH-1.0.4-cp310-cp310-musllinux_1_1_x86_64.whl
Algorithm | Hash digest | |
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MD5 | bc5e5178d2e7f8b9accfed220ce7651f |
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Hashes for PyRuSH-1.0.4-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Algorithm | Hash digest | |
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MD5 | 2baeb5ff884eb72a756783da6e9308e4 |
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BLAKE2b-256 | 724c2de835f704324cc3197e5064c92ae91016384c1bc9c9e3519002beb76f3d |
Hashes for PyRuSH-1.0.4-cp310-cp310-macosx_10_9_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | 7b9722db3c514423dc95c3663f2b012f8b84e0e15365b9d3fa98d26aecc4ba37 |
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MD5 | c99ed87656cd479bcb31f51108b1320b |
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BLAKE2b-256 | 29781f379a2df6a390c46dafe2eb0a3c92d98a4a39bafe33fd796a7aad39ee13 |
Hashes for PyRuSH-1.0.4-cp39-cp39-win_amd64.whl
Algorithm | Hash digest | |
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SHA256 | d4ca5c411e7939d9915ce6178e2f98785821cf1b4827272ad1ca8c52c6057a65 |
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MD5 | 37fe0afe4d0f9de482c71cf80b30c34c |
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BLAKE2b-256 | 943281b7ab90113e1aafd9cc1c0e78fff3067bb161fec50c596d72642f1523ef |
Hashes for PyRuSH-1.0.4-cp39-cp39-musllinux_1_1_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | b8d83fb981ee44670bcb548af29b1b887bb3acb93da2108d2e7e797800aae2ed |
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MD5 | fa14ab2454aed259308f359d5ec626ce |
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BLAKE2b-256 | 14134c72a210529905acbec0938e107ab2cdf466dbad3fbed29ed176f9bfb518 |
Hashes for PyRuSH-1.0.4-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | e96c63caefbc09b53188074420a0e7e74a74a4b5c2615a00470f07e58c07237d |
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MD5 | d317e260f2615bd3dafb976127ade8ff |
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BLAKE2b-256 | bd04e899e6af38a3dc251b339a1e7b4be87f00d0c9be1a6483a62e187bfe1c84 |
Hashes for PyRuSH-1.0.4-cp39-cp39-macosx_10_9_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | 1dd545ab16ce5e5269a43d24435fa82ffd87875f9b8645b1b6afa01a12ad1210 |
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MD5 | 94ff2fdd9986d7b9a477197eed8860d3 |
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BLAKE2b-256 | 4d0d8703cba214b7febf524e47c307b6c0ab7b2b6f6c7ea1f6f8d7c815bd045f |
Hashes for PyRuSH-1.0.4-cp38-cp38-win_amd64.whl
Algorithm | Hash digest | |
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SHA256 | e5ab68e6d6de31797baa4b4e7c9c7e524fc6a449e6b4a6e1e6199efe610f466a |
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MD5 | ab5aa8b543690d8ed432e5202117018c |
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BLAKE2b-256 | 6afd5d259b7dfc31c50f5417496dc6639d783d0bc450221a44624fc25b5e80ca |
Hashes for PyRuSH-1.0.4-cp38-cp38-musllinux_1_1_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | 84b9ffcd020ed493b6f6ad492be016516b71bbba6e027d8a5363b3ea06ca8821 |
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MD5 | 5b8a1af5a80efc83465a5bed3474d4d8 |
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BLAKE2b-256 | 0b00d5fed50ed7ea438ce4fb51c1a05179b00d0030d890b0d4f7478a99c14ed1 |
Hashes for PyRuSH-1.0.4-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | 28fefee4b605c0f24ac91644b81ea837de61308778285e16fc29cc3ffcf48366 |
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MD5 | aa903258fb1cf2767f4060b029f3eed5 |
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BLAKE2b-256 | 253418e765d368c07fb51acfc499ef653ca3fb3ded1343fe616d44b867de661e |
Hashes for PyRuSH-1.0.4-cp38-cp38-macosx_10_9_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | 10277b7e71d228985f360d0319a64ba9e9a63460b6c2311b40d9cacbd05a4d98 |
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MD5 | 8304188487b1605847123d7616cab85b |
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BLAKE2b-256 | 0b43edd56a5e3d0081fdfb1374e4814a0df53aebdd64458c0736dca0a2cf9caf |
Hashes for PyRuSH-1.0.4-cp37-cp37m-win_amd64.whl
Algorithm | Hash digest | |
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SHA256 | 7c46c45a4f5d3ada2c1f8b3de20b835305f76e458539e63e516fe2c1fc99afd5 |
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MD5 | 081ace1156154f7e4f3240b1809856ce |
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BLAKE2b-256 | e431b1f31477459f805b40678f6c3662e614ba5a8a4d865038f85c437f9c7c58 |
Hashes for PyRuSH-1.0.4-cp37-cp37m-musllinux_1_1_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | 3e3280a31be0d59a7b5eeafe7544b0f86786fdd1d67ca6e985b573e7a637caf7 |
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MD5 | 03f740985ad5dea235cfb7473b56bacf |
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BLAKE2b-256 | fea8d2e0a54b3c30243828db0bf86a09d8150c9622cd284a43407523360c4060 |
Hashes for PyRuSH-1.0.4-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | 533f0f4f064959b625e72afac52eae42948e104d27c723f6ca3287e7cc31f990 |
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MD5 | 2a55d7d1ecbd730cce9d45ef1bbb2ee6 |
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BLAKE2b-256 | 1c5514aea07ffbcb50c717cc0dc0aad4bb77b5fa4920cfcfe3fa66868476cb0f |
Hashes for PyRuSH-1.0.4-cp37-cp37m-macosx_10_9_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | eab81d6393e55f1cb0afe71511f3a44f2c564ab2d2ccdc635f045737e4625973 |
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MD5 | 604892c4e6e141d97a178ee234890eb9 |
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BLAKE2b-256 | c34fee9e989cf9762cf9f802c7cb4967da82bd1934858f84fb1ef358cfa2b9eb |
Hashes for PyRuSH-1.0.4-cp36-cp36m-win_amd64.whl
Algorithm | Hash digest | |
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SHA256 | de8f487bfd88eb4fa0823356f490696120094fd9910a4d62bc6de6c3d01c9e6b |
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MD5 | b64b3aceebe68f6d15818b4601e3ffdf |
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BLAKE2b-256 | bd9b1378f11d408de6b7a8a972111764667bc984d8b678ecd2cd48c2cb18c885 |
Hashes for PyRuSH-1.0.4-cp36-cp36m-musllinux_1_1_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | 055fdda9f174dcb8224fe9cb6e72c506dc1ee8c6ff5c180eb67010c1951ca979 |
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MD5 | 54193b95f48ecae4cef26e634dc117db |
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BLAKE2b-256 | f80d87191387011132f54eeb393b815cbc349c3ec6f04d794688441cf111c725 |
Hashes for PyRuSH-1.0.4-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | a04a6bcce61aec674b47cf025ac0a8cf382c6fe92bcc4554ff227af6547f3768 |
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MD5 | fc21ce023efd3685b46a5431d685c1a8 |
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BLAKE2b-256 | c839869ce9d1eeb755198071db6eef7e4a10a5fdea65d472ac768ce7cb939b5d |
Hashes for PyRuSH-1.0.4-cp36-cp36m-macosx_10_9_x86_64.whl
Algorithm | Hash digest | |
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SHA256 | 049986c89e1921d9c4688beb4acb79db9673bf77b212e38ff3e976b921f3bf17 |
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MD5 | 6f3d0334cc23d0dcabd5faa4db3ab865 |
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BLAKE2b-256 | a08fc48f18619ed261b6508675bf0655f5bfee69dc0ef380a5f2026dec98907b |