bioimageflow-tracking-tools
Tools for label-stack object extraction, Ultrack and btrack adapters, and migration metrics.
Tools
LabelsToObjects: converts 2D or TYX label images into object centroid and area tables.UltrackLink: links object tables with Ultrack.BTrackLink: links object tables with btrack.TrackMetrics: computes track length, displacement, speed, and area summaries.FilterObjects: filters object tables by area, frame, intensity, and position.TracksToLabels: renders track IDs back into label stacks.TrackTableValidate: validates required columns, frame order, and duplicate track frames.TrackSummary: reports duration, displacement, speed, and frame bounds per track.TrackQualityMetrics: computes gap counts, split/merge flags, and short-track fraction.
Use the live-cell migration tracking workflow in the main workflow catalog for a complete Ultrack and btrack comparison.
1 maintainer
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file bioimageflow_tracking_tools-0.1.9.tar.gz.
File metadata
- Download URL: bioimageflow_tracking_tools-0.1.9.tar.gz
- Upload date:
- Size: 14.1 kB
- Tags: Source
- Uploaded using Trusted Publishing? Yes
- Uploaded via:
uv/0.10.9 {"installer":{"name":"uv","version":"0.10.9","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"Ubuntu","version":"24.04","id":"noble","libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":true}
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
00c5b341b4ec52523f42007241931f47ecab1adf5234f154bca48ec1bf814e24
|
|
| MD5 |
05cb5dd900e09db6609df12ce6ba61a5
|
|
| BLAKE2b-256 |
36b0e7e7822bee93eff48823738a52bd5b768647e57eaa0ed0059e085cdff946
|
File details
Details for the file bioimageflow_tracking_tools-0.1.9-py3-none-any.whl.
File metadata
- Download URL: bioimageflow_tracking_tools-0.1.9-py3-none-any.whl
- Upload date:
- Size: 12.0 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? Yes
- Uploaded via:
uv/0.10.9 {"installer":{"name":"uv","version":"0.10.9","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"Ubuntu","version":"24.04","id":"noble","libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":true}
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
9d5586676c40af88db39de94afced49c4c8dc641486f49d01072f769ae56d076
|
|
| MD5 |
4b18c31f77ace654b11b61490bea2ad8
|
|
| BLAKE2b-256 |
3e978692af6e206235f6b18fd1e66fc7eed38a928e7d9f386a6b2a5e78209fbc
|
