Skip to main content

biopb-mcp

License MIT PyPI Python Version MCP CI/CD napari hub

biopb-mcp is the MCP component of the BioPB project

Installation - recommended

curl -fsSL https://biopb.org/install.sh | bash

Installation - alternative methods

These methods only install the mcp component without the rest of BioPB system.

From PyPI

pip install biopb-mcp        # or: uv pip install biopb-mcp

Standalone PyInstaller app bundles (the per-platform .zip/.tar.gz downloads) are temporarily disabled — installation is uv/pip-based for now. Use the recommended one-liner above, or the methods here.

Development Version

To install latest development version:

pip install "git+https://github.com/biopb/biopb.git#subdirectory=biopb-mcp"

Troubleshooting

For URL resolution, the auto-start fallback, and how to resolve startup failures (e.g. a port already in use on a shared node), see docs/troubleshooting.md.

Contributing

Contributions are very welcome. Read development.md first to understand the project architecture.

License

Distributed under the terms of the MIT license, "biopb-mcp" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Metadata

Release files for biopb-mcp 0.7.2

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for biopb-mcp 0.7.2
File Size Uploaded Provenance Actions
biopb_mcp-0.7.2.tar.gz 782.5 kB Without provenance Details for biopb_mcp-0.7.2.tar.gz

Built distribution (wheel)

Table of built distributions (wheels) for biopb-mcp 0.7.2
File Interpreter ABI Platform Actions
biopb_mcp-0.7.2-py3-none-any.whl Python 3 none any Details for biopb_mcp-0.7.2-py3-none-any.whl

Total release size: 983.9 kB

Release files / biopb_mcp-0.7.2.tar.gz

Download URL biopb_mcp-0.7.2.tar.gz
Size 782.5 kB
Tags Source
SHA-256 checksum
How to use checksums
9902028b26a30ee54fcb75116ff6cc3f9d43bb87341933edd78c0c0d60565928
BLAKE2b-256 checksum
How to use checksums
54773ab454428f1bdadaa77ce6e3da22e61cceae04f6cd47a800d40d55f2a139
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via uv/0.11.21 {"installer":{"name":"uv","version":"0.11.21","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"Ubuntu","version":"24.04","id":"noble","libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":true}

Release files / biopb_mcp-0.7.2-py3-none-any.whl

Download URL biopb_mcp-0.7.2-py3-none-any.whl
Size 201.4 kB
Tags Python 3
SHA-256 checksum
How to use checksums
b7b406d1329b3878f06314db8befc0da8224d2eea875d63fd1c49b39e29252c8
BLAKE2b-256 checksum
How to use checksums
8316e1a914fc9832cafe1e5d6cab0c70c861e4349e4a96b816fcbafc8ed22677
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via uv/0.11.21 {"installer":{"name":"uv","version":"0.11.21","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"Ubuntu","version":"24.04","id":"noble","libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":true}

Security for biopb-mcp 0.7.2

Provenance

Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.

No provenance found

None of the files in this release were uploaded with provenance metadata.

A note on package security

PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.

To learn more about protecting yourself from malicious actors, visit our package security documentation.

Anthropic, PBC Visionary sponsor Bloomberg Visionary sponsor Hudson River Trading Visionary sponsor Meta Visionary sponsor NVIDIA Visionary sponsor Microsoft Sustainability sponsor Depot Continuous Integration AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page