Performing image analysis by visiting biopb endpoints
Project description
biopb-mcp
biopb-mcp is the MCP component of the BioPB project
Installation - recommended
curl -fsSL https://biopb.org/install.sh | bash
Installation - alternative methods
These methods only install the mcp component without the rest of BioPB system.
Bundled Installers
Pre-built standalone installers are available from the Releases page. These include napari with the biopb-mcp plugin pre-installed—no Python setup required.
| Platform | Download |
|---|---|
| Windows | biopb-mcp-windows.zip |
| macOS (Intel) | biopb-mcp-macos-intel.tar.gz |
| macOS (Apple Silicon) | biopb-mcp-macos-arm.tar.gz |
| Linux | biopb-mcp-linux.tar.gz |
Development Version
To install latest development version:
pip install git+https://github.com/biopb/biopb-mcp.git
Troubleshooting
For URL resolution, the auto-start fallback, and how to resolve startup failures (e.g. a port already in use on a shared node), see docs/troubleshooting.md.
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the MIT license, "biopb-mcp" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.
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