Manual segmentation of 3D brain structures in a common anatomical space

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for adamltyson from gravatar.com adamltyson Avatar for alessandrofelder from gravatar.com alessandrofelder Avatar for willGraham01 from gravatar.com willGraham01

Unverified details

These details have not been verified by PyPI
Meta
Classifiers

Project description

Python Version PyPI Wheel Development Status Tests Coverage Status Code style: black Gitter

brainreg-segment

Segmentation of 1/2/3D brain structures in a common anatomical space

brainreg-segment is a companion to brainreg allowing manual segmentation of regions/objects within the brain (e.g. injection sites, probes etc.) allowing for automated analysis of brain region distribution, and visualisation (e.g. in brainrender).

Installation

brainreg-segment comes bundled with brainreg, so see the brainreg installation instructions.

brainreg-segment can be installed on it's own (pip install brainreg-segment), but you will need to register your data with brainreg first.

Usage

See user guide

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for adamltyson from gravatar.com adamltyson Avatar for alessandrofelder from gravatar.com alessandrofelder Avatar for willGraham01 from gravatar.com willGraham01

Unverified details

These details have not been verified by PyPI
Meta
Classifiers

Release history Release notifications | RSS feed

0.2.20

0.2.19

0.2.18

0.2.17

0.2.17rc3 pre-release

0.2.17rc2 pre-release

0.2.17rc0 pre-release

0.2.16

0.2.16rc0 pre-release

0.2.15rc0 pre-release

0.2.14

0.2.14rc0 pre-release

0.2.13

0.2.13rc0 pre-release

0.2.12

0.2.11

0.2.8

0.2.8rc0 pre-release

This version

0.2.7

0.2.7rc0 pre-release

0.2.6

0.2.6rc0 pre-release

0.2.5

0.2.4

0.2.3

0.2.2

0.2.2rc0 pre-release

0.2.1

0.1.3

0.1.2

0.1.1

0.1.0

0.0.4

0.0.2

0.0.1

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

brainreg-segment-0.2.7.tar.gz (13.7 MB view details)

Uploaded Source

Built Distribution

brainreg_segment-0.2.7-py3-none-any.whl (26.5 kB view details)

Uploaded Python 3

File details

Details for the file brainreg-segment-0.2.7.tar.gz.

File metadata

  • Download URL: brainreg-segment-0.2.7.tar.gz
  • Upload date:
  • Size: 13.7 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.60.0 CPython/3.9.4

File hashes

Hashes for brainreg-segment-0.2.7.tar.gz
Algorithm Hash digest
SHA256 c0bd7a6029a80a1f32d9e330ccc72920f19518e5ae54265d4058620a464a4561
MD5 ba40c68450862e6894b8e068f838454a
BLAKE2b-256 c14c8747e314fee10cb3d59377c58265383ce5e26b791c28d1be3ba2bef92ad7

See more details on using hashes here.

File details

Details for the file brainreg_segment-0.2.7-py3-none-any.whl.

File metadata

  • Download URL: brainreg_segment-0.2.7-py3-none-any.whl
  • Upload date:
  • Size: 26.5 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.60.0 CPython/3.9.4

File hashes

Hashes for brainreg_segment-0.2.7-py3-none-any.whl
Algorithm Hash digest
SHA256 0f80c29ff706f52aacb3cfef507c79e2ae8a7efd2b36e7a22b560b8cf8e3a9bc
MD5 740538f75af68158da2453fd830fedad
BLAKE2b-256 0c3e832dca0df2ab24ed2c49702077e0980425754dab855a4d1c6fbea62693ce

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page