Skip to main content

Genotype

Build Status - Github Coverage Status GitHub issues-closed Average time to resolve an issue Percentage of issues still open CodeFactor Code style: black Manage SNP calling comparisons at Clinical Genomics. The package exposes a CLI and a bare bones web interface to visualize results stored in a SQLite database.

Install

$ conda install -c bioconda pysam pyyaml sqlalchemy flask
$ pip install genotype

Help?

Please check out the documentation

Release files for genotype 3.0.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for genotype 3.0.0
File Size Uploaded
genotype-3.0.0.tar.gz 72.8 kB Details

Built distribution (wheel)

Table of built distributions (wheels) for genotype 3.0.0
File Interpreter ABI Platform
genotype-3.0.0-py3-none-any.whl Python 3 none any Details

Total release size: 103.8 kB

Release files / genotype-3.0.0.tar.gz

Download URL genotype-3.0.0.tar.gz
Size 72.8 kB
Tags Source
SHA-256 checksum
How to use checksums
66bce261f68a47290298b38f3a412bc07998c8415d48ed0c4103cbdb645cad95
BLAKE2b-256 checksum
How to use checksums
47a25d3b52eaf22a959e8a452d2ad520b8d86fedc18114014401a1f7542266ad
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/50.3.0 requests-toolbelt/0.9.1 tqdm/4.49.0 CPython/3.8.5

Release files / genotype-3.0.0-py3-none-any.whl

Download URL genotype-3.0.0-py3-none-any.whl
Size 31.0 kB
Tags Python 3
SHA-256 checksum
How to use checksums
276978ac4c02692baaf4032229b47b07722b055c91f665bb186c1f64a7263e25
BLAKE2b-256 checksum
How to use checksums
7e390b607823faa4c6ef1e202545cc1ce20b2c946abf228abddc36f54695f472
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/50.3.0 requests-toolbelt/0.9.1 tqdm/4.49.0 CPython/3.8.5

Release history Release notifications | RSS feed

This release

3.0.0 This release

2 release files

2.5.2

2 release files

2.5.1

2 release files

2.5.0

2 release files

2.2.1

2 release files

2.2.0

2 release files

2.1.0

1 release file

2.0.1

2 release files

2.0.0

2 release files

Anthropic, PBC Visionary sponsor Bloomberg Visionary sponsor Hudson River Trading Visionary sponsor Meta Visionary sponsor NVIDIA Visionary sponsor Microsoft Sustainability sponsor Depot Continuous Integration AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page