mito-utils 0.1.0

Utilities for MT-based single cell Lineage Tracing (scLT).

MiTo

Mitochondrial lineage tracing and single-cell multi-omics in Python

Documentation

An extensive documentation of MiTo's key functionalitites and APIs is available at MiTo Docs.

Installation

1. Install mamba (or conda)
2. Clone this repo:

git clone https://github.com/andrecossa5/MiTo.git

3. Reproduce MiTo conda environment:

cd MiTo
mamba env create -f envs/environment.yml -n MiTo

3. Activate the environment, and install MiTo via pypi:

mamba activate MiTo
pip install mito_utils

4. Verify successfull installation:

import mito as mt

Releases

See CHANGELOG.md for a history of notable changes.