molgenis-emx2-pyclient 8.201.0

Python client for the Molgenis EMX2 API

Installation

pip install molgenis_emx2_pyclient

How to use

Within your Python project import the class Client and use it to sign in

from molgenis_emx2_pyclient import Client
...

...
client = Client('https://example.molgeniscloud.org')
client.signin('username', 'password')

Development

Clone the molgenis-emx2 repository from GitHub

git clone [e-mail]:molgenis/molgenis-emx2.git

Change the working directory to .../tools/pyclient

Create a virtual Python environment

On macOS:

python -m venv venv

On Linux:

python3.11 -m venv venv

On Windows:

py -3.11 venv venv

Activate the virtual environment

On macOS and Linux:

source venv/bin/activate

On Windows:

.venv\Scripts\activate.bat

Install the script dependencies

pip install -r requirements.txt

Build

(venv) $ python -m build

(venv) $ pip install dist/molgenis_emx2_pyclient*.whl