pygmes is a wraper for GeneMark-ES
This project aims at making GeneMark-ES more usable. By default GeneMark-ES has some problems with fragmented and incomplete genomes.
For metagenomic analysis this is an issue, thus I developed pygmes.
Status
Currently this project is very much WIP, so do expect problems and incomplete documentation.
It is just on pip already as it is a suggested package for EukCC (https://github.com/Finn-Lab/EukCC/)
Release files for pygmes 0.1.7
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| pygmes-0.1.7.tar.gz | 1.4 MB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| pygmes-0.1.7-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 2.8 MB
Release files / pygmes-0.1.7.tar.gz
| Download URL | pygmes-0.1.7.tar.gz |
|---|---|
| Size | 1.4 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
d87d85a67aa230b782f72940c4a60d5bddcdc0bc91c5615024918981abc25118
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.1.1 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.0.1 requests-toolbelt/0.9.1 tqdm/4.45.0 CPython/3.7.3
|
Release files / pygmes-0.1.7-py3-none-any.whl
| Download URL | pygmes-0.1.7-py3-none-any.whl |
|---|---|
| Size | 1.4 MB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
246a80fe42d6c9d7b97f65daceeb6e8aeb8ba1978347dedc19d6773e82952f49
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|
BLAKE2b-256 checksum How to use checksums |
c12947057b11da700d92b52c36467188eb683b82041225c5bad16998461b5bc2
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.1.1 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.0.1 requests-toolbelt/0.9.1 tqdm/4.45.0 CPython/3.7.3
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